RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA505329", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA505329 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26665334 26665334 PRJNA505329_P_NODE_37241_length_176_cov_2.173228_g36770_i0 PRJNA505329 37241 176 2.173228 3.82488128 Chlorobiota bacterium 2268192 Bacteria Bacteria 102 2.24e-24   NR MBK8912500.1 2268192 g36770 i0 78.6 2.82954545454545 56 12 95.5 0 172 5 129 184 MBK8912500.1 NAD(P)-dependent oxidoreductase [Chlorobiota bacterium] diamond 498 102 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium
26792342 26792342 PRJNA505329_P_NODE_27801_length_190_cov_2.893617_g27330_i0 PRJNA505329 27801 190 2.893617 5.4978723 Chlorobiota bacterium 2268192 Bacteria Bacteria 126 5.47e-32   NR MBL7988120.1 2268192 g27330 i0 96.7 0.963157894736842 61 2 96.3 0 187 5 740 800 MBL7988120.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Chlorobiota bacterium] diamond 183 126 1 Bacteria FCB group Pseudomonadati Chlorobiota         Chlorobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;