contig_metadata
19 rows where bioproject = "PRJNA505329", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1110206 | 1110206 | PRJNA505329_P_NODE_14241_length_233_cov_2.766304_g13770_i0 | PRJNA505329 | 14241 | 233 | 2.766304 | 6.44548832 | Candidatus Southlakia | 3350975 | Bacteria | Bacteria | 187 | 5.48e-43 | NTclustered | gi|2028829559|gb|CP072328.1| | 713051 | g13770 | i0 | 100 | 79.1330472103004 | 101 | 0 | 85 | 0 | 133 | 233 | 905092 | 904992 | TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome | blastn | 18438 | 187 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | TM7 phylum sp. oral taxon 349 | ||||||
| 3034321 | 3034321 | PRJNA505329_P_NODE_17843_length_216_cov_3.413174_g17372_i0 | PRJNA505329 | 17843 | 216 | 3.413174 | 7.37245584 | Candidatus Nanogingivalaceae bacterium | 2725942 | Bacteria | Bacteria | 390 | 3.559999999999999e-104 | NTclustered | gi|2070571752|gb|CP072208.2| | 2725942 | g17372 | i0 | 99.533 | 246.74537037037 | 214 | 1 | 99 | 0 | 1 | 214 | 110268 | 110055 | MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome | blastn | 53297 | 390 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalaceae bacterium | |||
| 3034657 | 3034657 | PRJNA505329_P_NODE_4583_length_369_cov_3.112500_g4117_i0 | PRJNA505329 | 4583 | 369 | 3.1125 | 11.485125 | Candidatus Southlakia epibionticum | 3043284 | Bacteria | Bacteria | 606 | 5.969999999999997e-169 | NTclustered | gi|2516687873|gb|CP124550.1| | 3043284 | g4117 | i0 | 96.721 | 191.314363143631 | 366 | 9 | 99 | 3 | 2 | 366 | 151244 | 150881 | Candidatus Southlakia epibionticum strain ML1 chromosome, complete genome | blastn | 70595 | 606 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Southlakia | Candidatus Southlakia epibionticum | ||
| 6861125 | 6861125 | PRJNA505329_P_NODE_26446_length_192_cov_2.153846_g25975_i0 | PRJNA505329 | 26446 | 192 | 2.153846 | 4.13538432 | uncultured Candidatus Saccharibacteria bacterium | 179883 | Bacteria | Bacteria | 346 | 6.77e-91 | NTclustered | gi|220682311|gb|FJ542918.1| | 179883 | g25975 | i0 | 99.474 | 98.8645833333333 | 190 | 1 | 99 | 0 | 3 | 192 | 83 | 272 | Uncultured candidate division TM7 bacterium clone A10-07D 16S ribosomal RNA gene, partial sequence | blastn | 18982 | 346 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | uncultured Candidatus Saccharibacteria bacterium | ||||||
| 6861470 | 6861470 | PRJNA505329_P_NODE_8106_length_255_cov_2.398058_g7635_i0 | PRJNA505329 | 8106 | 255 | 2.398058 | 6.1150479 | Candidatus Southlakia epibionticum | 3043284 | Bacteria | Bacteria | 460 | 3.25e-125 | NTclustered | gi|2516687873|gb|CP124550.1| | 3043284 | g7635 | i0 | 99.603 | 92.9647058823529 | 252 | 1 | 99 | 0 | 1 | 252 | 152814 | 152563 | Candidatus Southlakia epibionticum strain ML1 chromosome, complete genome | blastn | 23706 | 460 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Southlakia | Candidatus Southlakia epibionticum | ||
| 9411645 | 9411645 | PRJNA505329_P_NODE_4628_length_366_cov_4.085174_g4162_i0 | PRJNA505329 | 4628 | 366 | 4.085174 | 14.95173684 | Candidatus Saccharibacteria bacterium oral taxon 955 | 2572087 | Bacteria | Bacteria | 555 | 2.1699999999999998e-153 | NTclustered | gi|1663049602|gb|CP040008.1| | 2572087 | g4162 | i0 | 94.215 | 223.983606557377 | 363 | 21 | 99 | 0 | 1 | 363 | 139192 | 138830 | Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome | blastn | 81978 | 555 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 955 | ||||||
| 14512386 | 14512386 | PRJNA505329_P_NODE_36312_length_177_cov_3.984375_g35841_i0 | PRJNA505329 | 36312 | 177 | 3.984375 | 7.05234375 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 309 | 8.04e-80 | NTclustered | gi|1958075319|gb|CP064995.1| | 2026720 | g35841 | i0 | 100 | 62.1920903954802 | 167 | 0 | 94 | 0 | 1 | 167 | 693802 | 693968 | Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome | blastn | 11008 | 309 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 19609506 | 19609506 | PRJNA505329_P_NODE_40796_length_170_cov_4.041322_g40325_i0 | PRJNA505329 | 40796 | 170 | 4.041322 | 6.8702474 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 112 | 5.85e-28 | NR | NCO10741.1 | 2026720 | g40325 | i0 | 94.6 | 7.90588235294118 | 56 | 3 | 98.8 | 0 | 168 | 1 | 80 | 135 | NCO10741.1 recombinase RecA [Candidatus Saccharibacteria bacterium] | diamond | 1344 | 112 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 24709497 | 24709497 | PRJNA505329_P_NODE_45480_length_166_cov_0.888889_g45009_i0 | PRJNA505329 | 45480 | 166 | 0.888889 | 1.47555574 | Candidatus Nanogingivalaceae bacterium | 2725942 | Bacteria | Bacteria | 302 | 1.2500000000000001e-77 | NTclustered | gi|2070571752|gb|CP072208.2| | 2725942 | g45009 | i0 | 100 | 58.0361445783133 | 163 | 0 | 98 | 0 | 1 | 163 | 111654 | 111492 | MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome | blastn | 9634 | 302 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalaceae bacterium | |||
| 26824062 | 26824062 | PRJNA505329_P_NODE_14281_length_233_cov_2.766304_g13810_i0 | PRJNA505329 | 14281 | 233 | 2.766304 | 6.44548832 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 47.8 | 5.33e-4 | NR | MCL1839690.1 | 2026720 | g13810 | i0 | 64.5 | 2.43347639484979 | 31 | 11 | 39.9 | 0 | 227 | 135 | 264 | 294 | MCL1839690.1 DNA replication and repair protein RecF [Candidatus Saccharibacteria bacterium] | diamond | 567 | 47.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 27250546 | 27250546 | PRJNA505329_P_NODE_9943_length_233_cov_5.298913_g9472_i0 | PRJNA505329 | 9943 | 233 | 5.298913 | 12.34646729 | Candidatus Saccharimonas | 1331051 | Bacteria | Bacteria | 104 | 1.98e-25 | NR | MEO8691604.1 | 1917697 | g9472 | i0 | 54.7 | 4.09442060085837 | 106 | 19 | 99.1 | 1 | 233 | 3 | 32 | 137 | MEO8691604.1 RimK family alpha-L-glutamate ligase [Candidatus Saccharimonas sp.] | diamond | 954 | 104 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonas | Candidatus Saccharimonas sp. | ||
| 27898191 | 27898191 | PRJNA505329_P_NODE_45425_length_166_cov_0.888889_g44954_i0 | PRJNA505329 | 45425 | 166 | 0.888889 | 1.47555574 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 88.6 | 1.87e-19 | NR | MDB5162707.1 | 2026720 | g44954 | i0 | 94.3 | 1.91566265060241 | 53 | 3 | 95.8 | 0 | 6 | 164 | 230 | 282 | MDB5162707.1 atpG [Candidatus Saccharibacteria bacterium] | diamond | 318 | 88.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 28119278 | 28119278 | PRJNA505329_P_NODE_31885_length_184_cov_2.970370_g31414_i0 | PRJNA505329 | 31885 | 184 | 2.97037 | 5.4654808 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 87.8 | 2.31e-19 | NR | HEU5122105.1 | 2973664 | g31414 | i0 | 71.7 | 1.95652173913043 | 60 | 17 | 97.8 | 0 | 4 | 183 | 146 | 205 | HEU5122105.1 YebC/PmpR family DNA-binding transcriptional regulator [Candidatus Saccharimonadales bacterium] | diamond | 360 | 87.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 28576805 | 28576805 | PRJNA505329_P_NODE_11647_length_233_cov_3.331522_g11176_i0 | PRJNA505329 | 11647 | 233 | 3.331522 | 7.76244626 | Bacteria | 2 | Bacteria | Bacteria | 68.6 | 2.6e-11 | NR | KKW02919.1 | 1619071 | g11176 | i0 | 97 | 7.6480686695279 | 33 | 1 | 42.5 | 0 | 2 | 100 | 567 | 599 | KKW02919.1 MAG: Type IV secretory pathway VirB4 component-like protein [Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9] | diamond | 1782 | 68.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9 | ||||||
| 29476720 | 29476720 | PRJNA505329_P_NODE_45910_length_165_cov_2.663793_g45439_i0 | PRJNA505329 | 45910 | 165 | 2.663793 | 4.39525845 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 67.4 | 1.58e-11 | NR | MBI3889681.1 | 2026720 | g45439 | i0 | 53.7 | 0.981818181818182 | 54 | 25 | 98.2 | 0 | 1 | 162 | 105 | 158 | MBI3889681.1 sphingosine kinase [Candidatus Saccharibacteria bacterium] | diamond | 162 | 67.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 31040678 | 31040678 | PRJNA505329_P_NODE_33795_length_181_cov_3.090909_g33324_i0 | PRJNA505329 | 33795 | 181 | 3.090909 | 5.59454529 | Candidatus Mycosynbacter | 2831665 | Bacteria | Bacteria | 122 | 1.63e-30 | NR | MCA9338224.1 | 2026720 | g33324 | i0 | 95 | 16.9060773480663 | 60 | 3 | 99.4 | 0 | 180 | 1 | 496 | 555 | MCA9338224.1 ATP-dependent zinc metalloprotease FtsH [Candidatus Saccharibacteria bacterium] | diamond | 3060 | 122 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 31562682 | 31562682 | PRJNA505329_P_NODE_25116_length_194_cov_2.813793_g24645_i0 | PRJNA505329 | 25116 | 194 | 2.813793 | 5.45875842 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 62 | 1.27e-9 | NR | MDB5167905.1 | 2026720 | g24645 | i0 | 81.3 | 1.48453608247423 | 32 | 6 | 49.5 | 0 | 5 | 100 | 153 | 184 | MDB5167905.1 putative ribonuclease [Candidatus Saccharibacteria bacterium] | diamond | 288 | 62 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 32258800 | 32258800 | PRJNA505329_P_NODE_10438_length_233_cov_4.157609_g9967_i0 | PRJNA505329 | 10438 | 233 | 4.157609 | 9.68722897 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 64.7 | 5.87e-10 | NR | HRF28388.1 | 2026720 | g9967 | i0 | 93.9 | 0.424892703862661 | 33 | 2 | 42.5 | 0 | 100 | 2 | 111 | 143 | HRF28388.1 recombinase family protein [Candidatus Saccharibacteria bacterium] | diamond | 99 | 64.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 32322049 | 32322049 | PRJNA505329_P_NODE_42779_length_168_cov_2.260504_g42308_i0 | PRJNA505329 | 42779 | 168 | 2.260504 | 3.79764672 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 45.8 | 0.00109 | NR | MCA9338359.1 | 2026720 | g42308 | i0 | 48.1 | 0.964285714285714 | 54 | 27 | 94.6 | 1 | 9 | 167 | 129 | 182 | MCA9338359.1 endolytic transglycosylase MltG [Candidatus Saccharibacteria bacterium] | diamond | 162 | 45.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;