RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA505329", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA505329 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28151125 28151125 PRJNA505329_P_NODE_40945_length_170_cov_2.537190_g40474_i0 PRJNA505329 40945 170 2.53719 4.313223 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 45.8 0.00114   NR HZR84219.1 2838779 g40474 i0 43.1 0.9 51 29 90 0 163 11 188 238 HZR84219.1 TIGR04141 family sporadically distributed protein [Candidatus Binatia bacterium] diamond 153 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30708874 30708874 PRJNA505329_P_NODE_19874_length_201_cov_4.269737_g19403_i0 PRJNA505329 19874 201 4.269737 8.58217137 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 47.8 3.58e-4   NR MFQ5683932.1 2838779 g19403 i0 63.6 0.492537313432836 33 12 49.3 0 102 200 375 407 MFQ5683932.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Candidatus Binatia bacterium] diamond 99 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32385037 32385037 PRJNA505329_P_NODE_50459_length_161_cov_2.508929_g49988_i0 PRJNA505329 50459 161 2.508929 4.03937569 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 103 3.68e-24   NR HSE88699.1 2838779 g49988 i0 94.2 0.968944099378882 52 3 96.9 0 158 3 285 336 HSE88699.1 ATP-dependent DNA ligase [Candidatus Binatia bacterium] diamond 156 103 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;