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contig_metadata

12 rows where bioproject = "PRJNA498309" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA498309 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1109106 1109106 PRJNA498309_P_NODE_82001_length_244_cov_2.434783_g79852_i0 PRJNA498309 82001 244 2.434783 5.94087052 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 435 1.87e-117   NTclustered gi|937513727|gb|CP012850.1| 1353260 g79852 i0 98.77 60.5983606557377 244 3 100 0 1 244 847937 848180 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 14786 435 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
4936885 4936885 PRJNA498309_P_NODE_26344_length_560_cov_1.906310_g24391_i0 PRJNA498309 26344 560 1.90631 10.675336 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 603 1.2099999999999996e-167   NTclustered gi|937513727|gb|CP012850.1| 1353260 g24391 i0 87.337 54.4767857142857 537 55 94 12 4 531 847780 848312 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 30507 603 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
13235263 13235263 PRJNA498309_P_NODE_86911_length_229_cov_1.703125_g84762_i0 PRJNA498309 86911 229 1.703125 3.90015625 Nitrosopumilus sp. K4 2795383 Archaea Archaea 176 1.16e-39   NTclustered gi|2028944715|gb|CP067007.1| 2795383 g84762 i0 82.212 1.81659388646288 208 33 90 4 23 228 201168 201373 Nitrosopumilus sp. K4 chromosome, complete genome blastn 416 176 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp. K4
23434065 23434065 PRJNA498309_P_NODE_97099_length_201_cov_1.890244_g94950_i0 PRJNA498309 97099 201 1.890244 3.79939044 Candidatus Nitrosopumilus sediminis 1229909 Archaea Archaea 202 1.6399999999999998e-47   NTclustered gi|407047065|gb|CP003843.1| 1229909 g94950 i0 86.096 4.90049751243781 187 26 93 0 15 201 746224 746410 Candidatus Nitrosopumilus sp. AR2, complete genome blastn 985 202 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus sediminis
27393239 27393239 PRJNA498309_P_NODE_109743_length_173_cov_2.058824_g107594_i0 PRJNA498309 109743 173 2.058824 3.56176552 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 47 5.44e-5   NR MDW0342578.1 2169593 g107594 i0 100 0.38150289017341 22 0 38.2 0 66 1 1 22 MDW0342578.1 histidine phosphatase family protein [Nitrososphaeraceae archaeon] diamond 66 47 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27393267 27393267 PRJNA498309_P_NODE_95903_length_204_cov_2.089820_g93754_i0 PRJNA498309 95903 204 2.08982 4.2632328 Thaumarchaeota archaeon 13_1_4 2026795 Archaea Archaea 101 2.1499999999999994e-23   NR OLB89683.1 1805393 g93754 i0 85.7 2.47058823529412 56 8 82.4 0 170 3 2 57 OLB89683.1 MAG: threonine ammonia-lyase [Thaumarchaeota archaeon 13_1_40CM_38_12] diamond 504 101 1 Archaea   Thermoproteati Nitrososphaerota         Thaumarchaeota archaeon 13_1_40CM_38_12
27456478 27456478 PRJNA498309_S_NODE_22483_length_409_cov_7.831551_g20344_i0 PRJNA498309 22483 409 7.831551 32.03104359 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 135 1.15e-33   NR MDW0176774.1 2169593 g20344 i0 55.7 0.894865525672372 122 54 89.5 0 23 388 141 262 MDW0176774.1 DDE-type integrase/transposase/recombinase [Nitrososphaeraceae archaeon] diamond 366 135 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29382305 29382305 PRJNA498309_P_NODE_44589_length_408_cov_2.010782_g42459_i0 PRJNA498309 44589 408 2.010782 8.20399056 Nitrososphaerota archaeon 2026795 Archaea Archaea 44.7 0.0437   NR MDR0470364.1 2026795 g42459 i0 34.7 0.551470588235294 75 48 55.1 1 45 269 489 562 MDR0470364.1 MobA/MobL family protein [Nitrososphaerota archaeon] diamond 225 44.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29666028 29666028 PRJNA498309_P_NODE_14090_length_789_cov_26.085106_g12480_i0 PRJNA498309 14090 789 26.085106 205.81148634 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 192 1.46e-58   NR MDW0136151.1 2169593 g12480 i0 97 1.50570342205323 99 3 37.6 0 491 787 1 99 MDW0136151.1 response regulator [Nitrososphaeraceae archaeon] diamond 1188 192 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30013965 30013965 PRJNA498309_P_NODE_90611_length_218_cov_1.972376_g88462_i0 PRJNA498309 90611 218 1.972376 4.29977968 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 81.3 7.27e-16   NR MDW0176774.1 2169593 g88462 i0 55.9 0.935779816513762 68 30 93.6 0 217 14 150 217 MDW0176774.1 DDE-type integrase/transposase/recombinase [Nitrososphaeraceae archaeon] diamond 204 81.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30060779 30060779 PRJNA498309_P_NODE_107931_length_177_cov_1.364286_g105782_i0 PRJNA498309 107931 177 1.364286 2.41478622 Archaea 2157 Archaea Archaea 103 7.300000000000001e-27   NR TLY05125.1 2026795 g105782 i0 89.7 4.91525423728814 58 6 98.3 0 175 2 10 67 TLY05125.1 MAG: dihydroxy-acid dehydratase, partial [Nitrososphaerota archaeon] diamond 870 104 0.990384615384615 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30393440 30393440 PRJNA498309_P_NODE_56253_length_344_cov_23.967427_g54105_i0 PRJNA498309 56253 344 23.967427 82.44794888 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 152 6.72e-41   NR MDW0246809.1 2169593 g54105 i0 94.9 0.680232558139535 78 4 68 0 100 333 21 98 MDW0246809.1 CoA-binding protein [Nitrososphaeraceae archaeon] diamond 234 152 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;