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contig_metadata

16 rows where bioproject = "PRJNA498309" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA498309 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
481494 481494 PRJNA498309_P_NODE_88361_length_224_cov_42.620321_g86212_i0 PRJNA498309 88361 224 42.620321 95.46951904 Idiosepius paradoxus 294707 Mollusca Mollusca 54.7 0.006   NTclustered gi|325504932|dbj|AB586703.1| 294707 g86212 i0 100 0.379464285714286 29 0 13 0 4 32 6 34 Idiosepius paradoxus cenG mRNA for centaurin gamma homolog, complete cds blastn 85 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda   Idiosepiidae Idiosepius Idiosepius paradoxus
4307465 4307465 PRJNA498309_P_NODE_34644_length_477_cov_10.304545_g32601_i0 PRJNA498309 34644 477 10.304545 49.15267965 Ruditapes philippinarum 129788 Mollusca Mollusca 67.6 1.66e-6   NTclustered gi|2616504246|ref|XR_009624436.1| 129788 g32601 i0 84.848 0.138364779874214 66 10 14 0 55 120 112 177 PREDICTED: Ruditapes philippinarum uncharacterized LOC132721255 (LOC132721255), ncRNA blastn 66 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
4308355 4308355 PRJNA498309_P_NODE_89544_length_221_cov_2.440217_g87395_i0 PRJNA498309 89544 221 2.440217 5.39287957 Haliotis rufescens 6454 Mollusca Mollusca 60.2 1.17e-4   NTclustered gi|2245691288|ref|XM_048381680.1| 6454 g87395 i0 97.143 21.3800904977376 35 1 16 0 128 162 4002 3968 PREDICTED: Haliotis rufescens uncharacterized LOC124115498 (LOC124115498), transcript variant X19, mRNA blastn 4725 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
7487383 7487383 PRJNA498309_P_NODE_94846_length_207_cov_1.264706_g92697_i0 PRJNA498309 94846 207 1.264706 2.61794142 Stylommatophora 6527 Mollusca Mollusca 377 2.63e-100   NTclustered gi|1700712075|gb|MN022666.1| 145789 g92697 i0 99.517 100.033816425121 207 1 100 0 1 207 2729 2935 Caryodes dufresnii 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20707 377 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Caryodidae Caryodes Caryodes dufresnii
8133753 8133753 PRJNA498309_P_NODE_36847_length_460_cov_8.257683_g34784_i0 PRJNA498309 36847 460 8.257683 37.9853418 Ruditapes philippinarum 129788 Mollusca Mollusca 67.6 1.59e-6   NTclustered gi|2616504246|ref|XR_009624436.1| 129788 g34784 i0 84.848 0.143478260869565 66 10 14 0 341 406 177 112 PREDICTED: Ruditapes philippinarum uncharacterized LOC132721255 (LOC132721255), ncRNA blastn 66 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
9410030 9410030 PRJNA498309_S_NODE_19168_length_475_cov_487.354545_g17077_i0 PRJNA498309 19168 475 487.354545 2314.93408875 Haliotis rufescens 6454 Mollusca Mollusca 82.4 5.9e-11   NTclustered gi|2245688928|ref|XM_048381009.1| 6454 g17077 i0 100 20.2547368421053 44 0 9 0 89 132 4562 4605 PREDICTED: Haliotis rufescens uncharacterized LOC125372073 (LOC125372073), partial mRNA blastn 9621 82.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
10036840 10036840 PRJNA498309_P_NODE_101448_length_190_cov_39.928105_g99299_i0 PRJNA498309 101448 190 39.928105 75.8633995 root 1 Root_unresolved Root_unresolved 54.7 0.005   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g99299 i0 100 0.747368421052632 29 0 15 0 1 29 29 57 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 142 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
10038150 10038150 PRJNA498309_S_NODE_39088_length_218_cov_11.202186_g36920_i0 PRJNA498309 39088 218 11.202186 24.42076548 Gastropoda 6448 Mollusca Mollusca 403 4.62e-108   NTclustered gi|973291008|gb|KU341311.1| 6532 g36920 i0 100 100 218 0 100 0 1 218 3419 3202 Limicolaria kambeul isolate O_lim_c 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 21800 403 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Achatinidae Limicolaria Limicolaria kambeul
10685326 10685326 PRJNA498309_P_NODE_97329_length_200_cov_6.680982_g95180_i0 PRJNA498309 97329 200 6.680982 13.361964 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.017   NTclustered gi|937961735|gb|KR534869.1| 98310 g95180 i0 100 0.14 28 0 14 0 5 32 1 28 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
15784202 15784202 PRJNA498309_P_NODE_92653_length_212_cov_3.400000_g90504_i0 PRJNA498309 92653 212 3.4 7.208 Sinonovacula constricta 98310 Mollusca Mollusca 52.8 0.019   NTclustered gi|937961735|gb|KR534869.1| 98310 g90504 i0 100 0.132075471698113 28 0 13 0 185 212 33 6 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
17057552 17057552 PRJNA498309_P_NODE_118514_length_157_cov_2.791667_g116365_i0 PRJNA498309 118514 157 2.791667 4.38291719 Bradybaena similaris 145626 Mollusca Mollusca 71.3 3.58e-8   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g116365 i0 75.524 52.7643312101911 143 35 96 0 15 157 53747342 53747200 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 8284 71.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
17059914 17059914 PRJNA498309_S_NODE_53674_length_152_cov_1.982906_g51506_i0 PRJNA498309 53674 152 1.982906 3.01401712 Potamilus streckersoni 2493646 Mollusca Mollusca 103 5.44e-24   NR KAK3604820.1 2493646 g51506 i0 96 1.97368421052632 50 2 98.7 0 152 3 549 598 KAK3604820.1 hypothetical protein CHS0354_000482 [Potamilus streckersoni] diamond 300 103 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni
28166464 28166464 PRJNA498309_P_NODE_96625_length_202_cov_2.606061_g94476_i0 PRJNA498309 96625 202 2.606061 5.26424322 Metazoa 33208 Mollusca Mollusca 61.2 6.51e-9   NR XP_005109163.1 6500 g94476 i0 66.7 13.7079207920792 36 12 53.5 0 16 123 141 176 XP_005109163.1 cyclin-L1 [Aplysia californica] diamond 2769 61.6 0.993506493506494 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
29003857 29003857 PRJNA498309_P_NODE_85968_length_232_cov_1.379487_g83819_i0 PRJNA498309 85968 232 1.379487 3.20040984 Bradybaena similaris 145626 Mollusca Mollusca 50.4 6.19e-5   NR BFZ13139.1 145626 g83819 i0 47.5 0.762931034482759 59 25 68.5 1 74 232 2 60 BFZ13139.1 hypothetical protein BsWGS_16177 [Bradybaena similaris] diamond 177 50.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
29761049 29761049 PRJNA498309_P_NODE_99451_length_195_cov_2.449367_g97302_i0 PRJNA498309 99451 195 2.449367 4.77626565 Elysia marginata 1093978 Mollusca Mollusca 42.4 0.0274   NR GFR89747.1 1093978 g97302 i0 53.6 0.430769230769231 28 13 43.1 0 72 155 806 833 GFR89747.1 polycystic kidney disease protein 1-like 2 [Elysia marginata] diamond 84 42.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia marginata
32889453 32889453 PRJNA498309_P_NODE_39820_length_438_cov_19.543641_g37715_i0 PRJNA498309 39820 438 19.543641 85.60114758 Candidula unifasciata 100452 Mollusca Mollusca 115 8.530000000000001e-27   NR CAG5134995.1 100452 g37715 i0 41.7 1.87671232876712 132 76 89.7 1 396 4 218 349 CAG5134995.1 unnamed protein product [Candidula unifasciata] diamond 822 115 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;