RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA498309", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA498309 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
481528 481528 PRJNA498309_P_NODE_90401_length_218_cov_10.911602_g88252_i0 PRJNA498309 90401 218 10.911602 23.78729236 Narnaviridae sp. 2583949 Viruses Viruses 87.8 2.32e-18   NR URG16978.1 2583949 g88252 i0 64.6 0.894495412844037 65 23 89.4 0 218 24 42 106 URG16978.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 195 87.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
28087596 28087596 PRJNA498309_P_NODE_19885_length_652_cov_4.302439_g18076_i0 PRJNA498309 19885 652 4.302439 28.05190228 Qianjiang botourmia-like virus 36 3347282 Viruses Viruses 98.2 1.11e-19   NR XHA87425.1 3347282 g18076 i0 59.3 0.418711656441718 91 36 41.4 1 382 651 133 223 XHA87425.1 MAG: putative RNA-dependent RNA polymerase, partial [Qianjiang botourmia-like virus 36] diamond 273 98.2 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Qianjiang botourmia-like virus 36
32321991 32321991 PRJNA498309_P_NODE_5459_length_1393_cov_9.064159_g4361_i0 PRJNA498309 5459 1393 9.064159 126.26373487 Ripabyl virus 3130356 Viruses Viruses 145 3.4399999999999996e-35   NR WZH59490.1 3130356 g4361 i0 32.3 0.712849964106245 331 209 71.1 8 1037 48 52 368 WZH59490.1 MAG: putative capsid protein [Ripabyl virus] diamond 993 145 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Ripabyl virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;