RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA498309" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA498309 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26665262 26665262 PRJNA498309_P_NODE_101021_length_191_cov_13.889610_g98872_i0 PRJNA498309 101021 191 13.88961 26.5291551 Stygiobacter electus 3032292 Bacteria Bacteria 99.8 1.58e-22   NR WP_321534394.1 3032292 g98872 i0 80.4 1.75916230366492 56 11 88 0 170 3 623 678 WP_321534394.1 dehydrogenase E1 component subunit alpha/beta [Stygiobacter electus] diamond 336 99.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Stygiobacter Stygiobacter electus
27929876 27929876 PRJNA498309_P_NODE_61685_length_320_cov_3.010601_g59537_i0 PRJNA498309 61685 320 3.010601 9.6339232 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 51.2 8.9e-5   NR MBK7259008.1 2026749 g59537 i0 46.4 1.115625 56 30 52.5 0 13 180 314 369 MBK7259008.1 C-GCAxxG-C-C family protein [Ignavibacteriota bacterium] diamond 357 51.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;