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contig_metadata

32 rows where bioproject = "PRJNA498309" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA498309 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3032708 3032708 PRJNA498309_P_NODE_98723_length_197_cov_2.125000_g96574_i0 PRJNA498309 98723 197 2.125 4.18625 Armatimonadota bacterium 2033014 Bacteria Bacteria 122 1.01e-31   NR MCL6532736.1 2033014 g96574 i0 100 0.883248730964467 58 0 88.3 0 22 195 127 184 MCL6532736.1 branched-chain amino acid ABC transporter permease [Armatimonadota bacterium] diamond 174 122 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
8133306 8133306 PRJNA498309_P_NODE_13467_length_809_cov_3.426166_g11876_i0 PRJNA498309 13467 809 3.426166 27.71768294 Armatimonadota bacterium 2033014 Bacteria Bacteria 350 4.3e-114   NR MCL6532432.1 2033014 g11876 i0 97 0.611866501854141 165 5 61.2 0 664 170 1 165 MCL6532432.1 hypothetical protein [Armatimonadota bacterium] diamond 495 350 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
8133675 8133675 PRJNA498309_P_NODE_32547_length_496_cov_2.028322_g30525_i0 PRJNA498309 32547 496 2.028322 10.06047712 Armatimonadota bacterium 2033014 Bacteria Bacteria 313 4.76e-98   NR MCL6536881.1 2033014 g30525 i0 99.4 0.961693548387097 159 1 96.2 0 487 11 640 798 MCL6536881.1 DEAD/DEAH box helicase [Armatimonadota bacterium] diamond 477 313 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
12587796 12587796 PRJNA498309_P_NODE_45290_length_403_cov_5.945355_g43158_i0 PRJNA498309 45290 403 5.945355 23.95978065 Armatimonadota bacterium 2033014 Bacteria Bacteria 117 1.43e-28   NR MCL6448852.1 2033014 g43158 i0 62.1 4.53349875930521 87 33 64.8 0 401 141 289 375 MCL6448852.1 sporulation protein YhbH [Armatimonadota bacterium] diamond 1827 117 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
13234135 13234135 PRJNA498309_P_NODE_16931_length_713_cov_2.667160_g15219_i0 PRJNA498309 16931 713 2.66716 19.0168508 Bacillati 1783272 Bacteria Bacteria 224 2.41e-69   NR MER3403115.1 2033014 g15219 i0 91.5 1.48948106591865 118 10 49.6 0 19 372 44 161 MER3403115.1 succinate--CoA ligase subunit alpha [Armatimonadota bacterium] diamond 1062 226 0.991150442477876 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
14509585 14509585 PRJNA498309_P_NODE_4452_length_1599_cov_7.362996_g3468_i0 PRJNA498309 4452 1599 7.362996 117.73430604 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 647 1.6499999999999993e-180   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g3468 i0 82.307 30.2357723577236 763 119 47 13 807 1562 2589041 2589794 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 48347 647 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
17686533 17686533 PRJNA498309_P_NODE_34314_length_480_cov_6.720090_g32273_i0 PRJNA498309 34314 480 6.72009 32.256432 Fimbriimonas 1005038 Bacteria Bacteria 544 6.33e-150   NTclustered gi|663071213|gb|CP007139.1| 661478 g32273 i0 89.066 128.18125 439 46 91 2 23 460 29166 28729 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 61527 544 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
20882326 20882326 PRJNA498309_P_NODE_20677_length_638_cov_3.405990_g18843_i0 PRJNA498309 20677 638 3.40599 21.7302162 Armatimonadota bacterium 2033014 Bacteria Bacteria 231 3.839999999999999e-74   NR MCL6532941.1 2033014 g18843 i0 93.6 0.587774294670846 125 8 58.8 0 386 12 1 125 MCL6532941.1 chemotaxis protein CheW [Armatimonadota bacterium] diamond 375 231 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27155343 27155343 PRJNA498309_P_NODE_97602_length_200_cov_1.466258_g95453_i0 PRJNA498309 97602 200 1.466258 2.932516 Bacteria 2 Bacteria Bacteria 93.2 3.57e-20   NR CUU11390.1 1661580 g95453 i0 95.6 1.35 45 2 67.5 0 189 55 270 314 CUU11390.1 hypothetical protein GBSOP10_111427 [Armatimonadetes bacterium GBS] diamond 270 93.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GBS
27393245 27393245 PRJNA498309_P_NODE_25203_length_574_cov_7.139665_g23266_i0 PRJNA498309 25203 574 7.139665 40.9816771 Armatimonadetes bacterium DC 1661583 Bacteria Bacteria 280 3.02e-92   NR CUU35790.1 1661583 g23266 i0 97.8 0.721254355400697 138 3 72.1 0 431 18 17 154 CUU35790.1 guanylate kinase [Armatimonadetes bacterium DC] diamond 414 280 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium DC
27519398 27519398 PRJNA498309_P_NODE_13423_length_810_cov_27.993532_g11832_i0 PRJNA498309 13423 810 27.993532 226.7476092 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 522 2.269999999999999e-169   NR MEJ5294471.1 2682145 g11832 i0 98.4 0.948148148148148 256 4 94.8 0 20 787 792 1047 MEJ5294471.1 carboxypeptidase regulatory-like domain-containing protein [Fimbriimonadales bacterium] diamond 768 522 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
27582473 27582473 PRJNA498309_P_NODE_42824_length_418_cov_13.829396_g40706_i0 PRJNA498309 42824 418 13.829396 57.80687528 Armatimonadota bacterium 2033014 Bacteria Bacteria 189 1.85e-52   NR MCL6533600.1 2033014 g40706 i0 89.3 0.739234449760766 103 11 73.9 0 394 86 593 695 MCL6533600.1 DNA gyrase subunit A [Armatimonadota bacterium] diamond 309 189 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27677561 27677561 PRJNA498309_P_NODE_12664_length_837_cov_20.695000_g11112_i0 PRJNA498309 12664 837 20.695 173.21715 Armatimonadia bacterium 2663015 Bacteria Bacteria 230 3.46e-72   NR MEN6302210.1 2663015 g11112 i0 61.6 0.663082437275986 185 68 65.9 2 160 711 2 184 MEN6302210.1 DNA cytosine methyltransferase [Armatimonadia bacterium] diamond 555 230 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
28466776 28466776 PRJNA498309_P_NODE_59946_length_328_cov_1.907216_g57798_i0 PRJNA498309 59946 328 1.907216 6.25566848 Armatimonadota bacterium 2033014 Bacteria Bacteria 123 2.5099999999999996e-31   NR MCL6532384.1 2033014 g57798 i0 92.6 0.621951219512195 68 5 62.2 0 210 7 56 123 MCL6532384.1 response regulator [Armatimonadota bacterium] diamond 204 123 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28561461 28561461 PRJNA498309_P_NODE_39967_length_437_cov_9.992500_g37861_i0 PRJNA498309 39967 437 9.9925 43.667225 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 114 4.5700000000000005e-27   NR MCX7686773.1 2682145 g37861 i0 100 0.363844393592677 53 0 36.4 0 152 310 130 182 MCX7686773.1 NAD-dependent epimerase/dehydratase family protein [Fimbriimonadales bacterium] diamond 159 114 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
28624688 28624688 PRJNA498309_P_NODE_117607_length_159_cov_1.262295_g115458_i0 PRJNA498309 117607 159 1.262295 2.00704905 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 51.2 1.18e-5   NR MCS6777372.1 2739509 g115458 i0 66.7 1.9622641509434 36 12 67.9 0 152 45 364 399 MCS6777372.1 PQQ-like beta-propeller repeat protein [Chthonomonadaceae bacterium] diamond 312 51.2 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28624691 28624691 PRJNA498309_P_NODE_34907_length_475_cov_8.139269_g32862_i0 PRJNA498309 34907 475 8.139269 38.66152775 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 299 1e-90   NR MCX7686928.1 2682145 g32862 i0 99.3 1.85684210526316 147 1 92.8 0 24 464 376 522 MCX7686928.1 DEAD/DEAH box helicase [Fimbriimonadales bacterium] diamond 882 299 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29129899 29129899 PRJNA498309_P_NODE_19489_length_659_cov_10.969453_g17697_i0 PRJNA498309 19489 659 10.969453 72.28869527 Armatimonadota bacterium 2033014 Bacteria Bacteria 122 3.42e-28   NR MCL6534197.1 2033014 g17697 i0 95 0.273141122913505 60 3 27.3 0 199 20 1 60 MCL6534197.1 glycoside hydrolase family 99-like domain-containing protein [Armatimonadota bacterium] diamond 180 122 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29287429 29287429 PRJNA498309_P_NODE_114669_length_164_cov_1.456693_g112520_i0 PRJNA498309 114669 164 1.456693 2.38897652 Armatimonadetes bacterium GBS 1661580 Bacteria Bacteria 100 7.879999999999999e-23   NR CUU05830.1 1661580 g112520 i0 90.7 0.98780487804878 54 5 98.8 0 1 162 555 608 CUU05830.1 S-layer homology domain-containing protein [Armatimonadetes bacterium GBS] diamond 162 100 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GBS
30234986 30234986 PRJNA498309_P_NODE_64392_length_308_cov_2.667897_g62244_i0 PRJNA498309 64392 308 2.667897 8.21712276 Armatimonadota bacterium 2033014 Bacteria Bacteria 47 0.00251   NR MFO7945380.1 2033014 g62244 i0 33.7 0.837662337662338 86 56 82.8 1 294 40 420 505 MFO7945380.1 hypothetical protein [Armatimonadota bacterium] diamond 258 47 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30456526 30456526 PRJNA498309_P_NODE_25813_length_566_cov_6.971645_g23868_i0 PRJNA498309 25813 566 6.971645 39.4595107 Armatimonadetes bacterium GBS 1661580 Bacteria Bacteria 231 9.440000000000001e-73   NR CUU10654.1 1661580 g23868 i0 95.1 0.651943462897526 123 6 65.2 0 174 542 158 280 CUU10654.1 release factor glutamine methyltransferase [Armatimonadetes bacterium GBS] diamond 369 231 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GBS
30961778 30961778 PRJNA498309_P_NODE_43634_length_413_cov_9.007979_g41512_i0 PRJNA498309 43634 413 9.007979 37.20295327 Armatimonadota bacterium 2033014 Bacteria Bacteria 225 3.85e-69   NR MCL6533332.1 2033014 g41512 i0 98.4 0.900726392251816 124 2 90.1 0 16 387 337 460 MCL6533332.1 VWA domain-containing protein [Armatimonadota bacterium] diamond 372 225 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31025010 31025010 PRJNA498309_S_NODE_27675_length_330_cov_4.983051_g25507_i0 PRJNA498309 27675 330 4.983051 16.4440683 Armatimonadota bacterium 2033014 Bacteria Bacteria 181 8.569999999999999e-52   NR MES2464906.1 2033014 g25507 i0 88.9 0.9 99 11 90 0 318 22 15 113 MES2464906.1 R3H domain-containing nucleic acid-binding protein [Armatimonadota bacterium] diamond 297 181 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31404385 31404385 PRJNA498309_P_NODE_63396_length_312_cov_4.345455_g61248_i0 PRJNA498309 63396 312 4.345455 13.5578196 Armatimonadetes bacterium GXS 1661582 Bacteria Bacteria 113 1.1e-26   NR CUU36351.1 1661582 g61248 i0 100 0.538461538461538 56 0 53.8 0 290 123 668 723 CUU36351.1 glycyl-tRNA synthetase beta chain [Armatimonadetes bacterium GXS] diamond 168 113 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium GXS
31499305 31499305 PRJNA498309_P_NODE_61976_length_319_cov_1.804965_g59828_i0 PRJNA498309 61976 319 1.804965 5.75783835 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 165 2.64e-47   NR MFN8138342.1 2682145 g59828 i0 81 0.940438871473354 100 19 94 0 5 304 267 366 MFN8138342.1 DNA polymerase III subunit beta [Fimbriimonadales bacterium] diamond 300 165 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31562629 31562629 PRJNA498309_P_NODE_49736_length_378_cov_2.504399_g47592_i0 PRJNA498309 49736 378 2.504399 9.46662822 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 225 4.300000000000001e-71   NR MEJ5293921.1 2682145 g47592 i0 98.2 0.888888888888889 112 2 88.9 0 359 24 15 126 MEJ5293921.1 hypothetical protein [Fimbriimonadales bacterium] diamond 336 225 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31609590 31609590 PRJNA498309_P_NODE_49476_length_379_cov_4.590643_g47335_i0 PRJNA498309 49476 379 4.590643 17.39853697 Bacteria 2 Bacteria Bacteria 169 5.93e-50   NR MCL6532051.1 2033014 g47335 i0 97.4 1.20316622691293 76 2 60.2 0 315 88 72 147 MCL6532051.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Armatimonadota bacterium] diamond 456 170 0.994117647058824 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31704401 31704401 PRJNA498309_P_NODE_78737_length_254_cov_8.004608_g76588_i0 PRJNA498309 78737 254 8.004608 20.33170432 root 1 Root_unresolved Root_unresolved 47.8 6.69e-5   NR GIV22148.1 2033014 g76588 i0 64.1 0.897637795275591 39 14 46.1 0 139 23 34 72 GIV22148.1 MAG: hypothetical protein KatS3mg023_3899 [Armatimonadota bacterium] diamond 228 47.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31752049 31752049 PRJNA498309_P_NODE_37577_length_454_cov_7.995204_g35510_i0 PRJNA498309 37577 454 7.995204 36.29822616 Armatimonadota bacterium 2033014 Bacteria Bacteria 290 1.06e-94   NR MCL6532372.1 2033014 g35510 i0 98.6 0.944933920704846 143 2 94.5 0 3 431 174 316 MCL6532372.1 extracellular solute-binding protein [Armatimonadota bacterium] diamond 429 290 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31815400 31815400 PRJNA498309_P_NODE_33317_length_489_cov_2.050885_g31289_i0 PRJNA498309 33317 489 2.050885 10.02882765 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 263 9.87e-85   NR MEJ5295447.1 2682145 g31289 i0 94.1 1.86503067484663 152 9 93.3 0 478 23 1 152 MEJ5295447.1 WD40 repeat domain-containing protein [Fimbriimonadales bacterium] diamond 912 263 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31973598 31973598 PRJNA498309_P_NODE_107458_length_178_cov_1.092199_g105309_i0 PRJNA498309 107458 178 1.092199 1.94411422 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 87.4 1.66e-18   NR MCX7687210.1 2682145 g105309 i0 76.4 0.926966292134832 55 13 92.7 0 177 13 219 273 MCX7687210.1 PLP-dependent aspartate aminotransferase family protein [Fimbriimonadales bacterium] diamond 165 87.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
32700551 32700551 PRJNA498309_P_NODE_53960_length_356_cov_2.285266_g51812_i0 PRJNA498309 53960 356 2.285266 8.13554696 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 199 6.28e-60   NR MEJ5295156.1 2682145 g51812 i0 93.9 0.969101123595506 115 7 96.9 0 350 6 291 405 MEJ5295156.1 serpin family protein [Fimbriimonadales bacterium] diamond 345 199 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;