RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA498309" and tax_phylum = "Acanthocephala"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Acanthocephala · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA498309 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15783685 15783685 PRJNA498309_P_NODE_5833_length_1340_cov_11.112049_g4696_i0 PRJNA498309 5833 1340 11.112049 148.9014566 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 334 1.5099999999999997e-101   NR KAI0982382.1 141832 g4696 i0 48.3 0.861940298507463 385 150 86.2 2 182 1336 317 652 KAI0982382.1 hypothetical protein GJ496_006668 [Pomphorhynchus laevis] diamond 1155 334 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
23434956 23434956 PRJNA498309_S_NODE_4839_length_1347_cov_46.752287_g3523_i0 PRJNA498309 4839 1347 46.752287 629.75330589 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 334 1.6199999999999995e-101   NR KAI0982382.1 141832 g3523 i0 48.3 0.857461024498886 385 150 85.7 2 1166 12 317 652 KAI0982382.1 hypothetical protein GJ496_006668 [Pomphorhynchus laevis] diamond 1155 334 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;