contig_metadata
35 rows where bioproject = "PRJNA498309", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1756194 | 1756194 | PRJNA498309_P_NODE_66442_length_299_cov_8.839695_g64294_i0 | PRJNA498309 | 66442 | 299 | 8.839695 | 26.43068805 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 503 | 6.389999999999998e-138 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g64294 | i0 | 99.281 | 3.7190635451505 | 278 | 2 | 93 | 0 | 1 | 278 | 180960 | 181237 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 1112 | 503 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 2384948 | 2384948 | PRJNA498309_S_NODE_17862_length_507_cov_14.218220_g15805_i0 | PRJNA498309 | 17862 | 507 | 14.21822 | 72.0863754 | Campylobacter | 194 | Bacteria | Bacteria | 872 | 0 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g15805 | i0 | 99.582 | 247.130177514793 | 479 | 1 | 94 | 1 | 7 | 484 | 29365 | 29843 | Campylobacter showae genome assembly, plasmid: V | blastn | 125295 | 872 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 3659640 | 3659640 | PRJNA498309_P_NODE_116643_length_160_cov_3.365854_g114494_i0 | PRJNA498309 | 116643 | 160 | 3.365854 | 5.3853664 | Campylobacter | 194 | Bacteria | Bacteria | 294 | 2e-75 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g114494 | i0 | 100 | 236.875 | 159 | 0 | 99 | 0 | 1 | 159 | 43224 | 43382 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 37900 | 296 | 0.993243243243243 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 6211759 | 6211759 | PRJNA498309_P_NODE_102605_length_188_cov_1.629139_g100456_i0 | PRJNA498309 | 102605 | 188 | 1.629139 | 3.06278132 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 348 | 1.84e-91 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g100456 | i0 | 100 | 100 | 188 | 0 | 100 | 0 | 1 | 188 | 701086 | 701273 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 18800 | 348 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 7486437 | 7486437 | PRJNA498309_P_NODE_109726_length_173_cov_2.176471_g107577_i0 | PRJNA498309 | 109726 | 173 | 2.176471 | 3.76529483 | root | 1 | Root_unresolved | Root_unresolved | 73.1 | 1.12e-8 | NTclustered | gi|1721134175|emb|LR698977.1| | 198 | g107577 | i0 | 100 | 40.6011560693642 | 39 | 0 | 23 | 0 | 135 | 173 | 496360 | 496322 | Campylobacter hyointestinalis isolate MGYG-HGUT-02307 genome assembly, chromosome: 1 | blastn | 7024 | 73.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hyointestinalis | ||
| 8761850 | 8761850 | PRJNA498309_P_NODE_46007_length_399_cov_3.613260_g43873_i0 | PRJNA498309 | 46007 | 399 | 3.61326 | 14.4169074 | Bacteria | 2 | Bacteria | Bacteria | 665 | 0 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g43873 | i0 | 100 | 18.0401002506266 | 360 | 0 | 90 | 0 | 23 | 382 | 5256 | 4897 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 7198 | 665 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 10683595 | 10683595 | PRJNA498309_P_NODE_100029_length_194_cov_1.636943_g97880_i0 | PRJNA498309 | 100029 | 194 | 1.636943 | 3.17566942 | Campylobacter showae | 204 | Bacteria | Bacteria | 359 | 8.809999999999999e-95 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g97880 | i0 | 100 | 263.010309278351 | 194 | 0 | 100 | 0 | 1 | 194 | 390358 | 390551 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 51024 | 359 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 11960045 | 11960045 | PRJNA498309_P_NODE_74830_length_268_cov_2.662338_g72681_i0 | PRJNA498309 | 74830 | 268 | 2.662338 | 7.13506584 | Helicobacter canis | 29419 | Bacteria | Bacteria | 457 | 4.45e-124 | NTclustered | gi|50957149|gb|AY596234.1| | 29419 | g72681 | i0 | 100 | 126.276119402985 | 247 | 0 | 92 | 0 | 22 | 268 | 799 | 1045 | Helicobacter canis strain ATCC 51401 23S ribosomal RNA gene, partial sequence | blastn | 33842 | 457 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter canis | ||
| 12587965 | 12587965 | PRJNA498309_P_NODE_64530_length_307_cov_8.203704_g62382_i0 | PRJNA498309 | 64530 | 307 | 8.203704 | 25.18537128 | root | 1 | Root_unresolved | Root_unresolved | 514 | 3.04e-141 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g62382 | i0 | 99.298 | 106.413680781759 | 285 | 0 | 92 | 1 | 25 | 307 | 315681 | 315965 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 32669 | 514 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 14509861 | 14509861 | PRJNA498309_P_NODE_59692_length_329_cov_2.630137_g57544_i0 | PRJNA498309 | 59692 | 329 | 2.630137 | 8.65315073 | Arcobacter cloacae | 1054034 | Bacteria | Bacteria | 523 | 5.459999999999998e-144 | NTclustered | gi|1847339566|gb|CP053833.1| | 1054034 | g57544 | i0 | 97.394 | 7.09726443768997 | 307 | 8 | 93 | 0 | 1 | 307 | 1938482 | 1938788 | Arcobacter cloacae strain LMG 26153 chromosome, complete genome | blastn | 2335 | 523 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter cloacae | ||
| 15136423 | 15136423 | PRJNA498309_P_NODE_102152_length_189_cov_1.723684_g100003_i0 | PRJNA498309 | 102152 | 189 | 1.723684 | 3.25776276 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 350 | 5.14e-92 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g100003 | i0 | 100 | 100 | 189 | 0 | 100 | 0 | 1 | 189 | 701270 | 701458 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 18900 | 350 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 15136828 | 15136828 | PRJNA498309_P_NODE_37852_length_452_cov_5.655422_g35782_i0 | PRJNA498309 | 37852 | 452 | 5.655422 | 25.56250744 | Campylobacter | 194 | Bacteria | Bacteria | 736 | 0 | NTclustered | gi|470482328|ref|NR_076526.1| | 76517 | g35782 | i0 | 96.026 | 257.464601769911 | 453 | 17 | 100 | 1 | 1 | 452 | 1664 | 1212 | Campylobacter hominis strain CH001A 23S ribosomal RNA gene, complete sequence | blastn | 116374 | 736 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 16411598 | 16411598 | PRJNA498309_P_NODE_52733_length_362_cov_2.784615_g50585_i0 | PRJNA498309 | 52733 | 362 | 2.784615 | 10.0803063 | Campylobacter | 194 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|1483583505|emb|LT631429.1| | 204 | g50585 | i0 | 100 | 243.370165745856 | 362 | 0 | 100 | 0 | 1 | 362 | 29498 | 29859 | Campylobacter showae genome assembly, plasmid: V | blastn | 88100 | 669 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 17686631 | 17686631 | PRJNA498309_P_NODE_45934_length_399_cov_49.049724_g43800_i0 | PRJNA498309 | 45934 | 399 | 49.049724 | 195.70839876 | Helicobacter | 209 | Bacteria | Bacteria | 691 | 0 | NTclustered | gi|50957150|gb|AY596235.1| | 29419 | g43800 | i0 | 100 | 128.71679197995 | 374 | 0 | 94 | 0 | 1 | 374 | 1028 | 1401 | Helicobacter canis strain ATCC 51402 23S ribosomal RNA gene, partial sequence | blastn | 51358 | 691 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter canis | ||
| 20883394 | 20883394 | PRJNA498309_P_NODE_83657_length_239_cov_1.485149_g81508_i0 | PRJNA498309 | 83657 | 239 | 1.485149 | 3.54950611 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 168 | 1.1699999999999999e-52 | NR | MCH3765196.1 | 195 | g81508 | i0 | 94.9 | 1.98326359832636 | 79 | 4 | 99.2 | 0 | 3 | 239 | 9 | 87 | MCH3765196.1 hypothetical protein [Campylobacter coli] | diamond | 474 | 169 | 0.994082840236686 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 26887413 | 26887413 | PRJNA498309_P_NODE_67001_length_297_cov_6.773077_g64853_i0 | PRJNA498309 | 67001 | 297 | 6.773077 | 20.11603869 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40.8 | 0.0282 | NR | GAA8923846.1 | 210 | g64853 | i0 | 84.2 | 0.191919191919192 | 19 | 3 | 19.2 | 0 | 292 | 236 | 1 | 19 | GAA8923846.1 hypothetical protein Kyoto166A_3890 [Helicobacter pylori] | diamond | 57 | 40.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27266724 | 27266724 | PRJNA498309_P_NODE_7483_length_1143_cov_2.827306_g6213_i0 | PRJNA498309 | 7483 | 1143 | 2.827306 | 32.31610758 | Campylobacter sp. | 205 | Bacteria | Bacteria | 138 | 1.75e-32 | NR | MBP5778903.1 | 205 | g6213 | i0 | 54.7 | 0.719160104986877 | 137 | 59 | 35.7 | 2 | 454 | 861 | 52 | 186 | MBP5778903.1 ATP-binding protein [Campylobacter sp.] | diamond | 822 | 138 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter sp. | ||
| 27424911 | 27424911 | PRJNA498309_P_NODE_16063_length_733_cov_461.831897_g14392_i0 | PRJNA498309 | 16063 | 733 | 461.831897 | 3385.22780501 | Helicobacter pylori | 210 | Bacteria | Bacteria | 60.8 | 1.19e-8 | NR | WP_316480680.1 | 210 | g14392 | i0 | 100 | 0.102319236016371 | 25 | 0 | 10.2 | 0 | 133 | 59 | 4 | 28 | WP_316480680.1 hypothetical protein [Helicobacter pylori] | diamond | 75 | 60.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27645891 | 27645891 | PRJNA498309_P_NODE_109044_length_174_cov_11.138686_g106895_i0 | PRJNA498309 | 109044 | 174 | 11.138686 | 19.38131364 | Helicobacter pylori | 210 | Bacteria | Bacteria | 46.6 | 3.97e-5 | NR | WP_316480680.1 | 210 | g106895 | i0 | 100 | 1.37931034482759 | 20 | 0 | 34.5 | 0 | 3 | 62 | 6 | 25 | WP_316480680.1 hypothetical protein [Helicobacter pylori] | diamond | 240 | 46.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28087584 | 28087584 | PRJNA498309_P_NODE_101945_length_189_cov_3.828947_g99796_i0 | PRJNA498309 | 101945 | 189 | 3.828947 | 7.23670983 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40.4 | 0.0165 | NR | GAA8930966.1 | 210 | g99796 | i0 | 84.2 | 0.301587301587302 | 19 | 3 | 30.2 | 0 | 108 | 164 | 28 | 46 | GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori] | diamond | 57 | 40.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28340302 | 28340302 | PRJNA498309_P_NODE_117786_length_158_cov_3.842975_g115637_i0 | PRJNA498309 | 117786 | 158 | 3.842975 | 6.0719005 | Helicobacter pylori | 210 | Bacteria | Bacteria | 39.3 | 0.0437 | NR | GAA6966648.1 | 210 | g115637 | i0 | 60.9 | 0.436708860759494 | 23 | 9 | 43.7 | 0 | 59 | 127 | 3 | 25 | GAA6966648.1 hypothetical protein Kyoto211A_2720 [Helicobacter pylori] | diamond | 69 | 39.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28593046 | 28593046 | PRJNA498309_S_NODE_31367_length_285_cov_13.236000_g29199_i0 | PRJNA498309 | 31367 | 285 | 13.236 | 37.7226 | Helicobacter pylori | 210 | Bacteria | Bacteria | 55.8 | 4.42e-8 | NR | GAA8732296.1 | 210 | g29199 | i0 | 67.6 | 2.07368421052632 | 37 | 12 | 38.9 | 0 | 247 | 137 | 2 | 38 | GAA8732296.1 hypothetical protein Kyoto147A_0500 [Helicobacter pylori] | diamond | 591 | 55.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29239936 | 29239936 | PRJNA498309_P_NODE_79709_length_251_cov_4.752336_g77560_i0 | PRJNA498309 | 79709 | 251 | 4.752336 | 11.92836336 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 41.2 | 0.0167 | NR | WP_307781430.1 | 199 | g77560 | i0 | 53.3 | 1.31474103585657 | 30 | 14 | 35.9 | 0 | 11 | 100 | 30 | 59 | WP_307781430.1 M15 family metallopeptidase [Campylobacter concisus] | diamond | 330 | 41.6 | 0.990384615384615 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 29445213 | 29445213 | PRJNA498309_P_NODE_76930_length_261_cov_1.375000_g74781_i0 | PRJNA498309 | 76930 | 261 | 1.375 | 3.58875 | Arcobacter sp. F155 | 2044512 | Bacteria | Bacteria | 136 | 5.56e-39 | NR | RXJ75072.1 | 2044512 | g74781 | i0 | 98.6 | 0.804597701149425 | 70 | 1 | 80.5 | 0 | 50 | 259 | 1 | 70 | RXJ75072.1 hypothetical protein CRV03_14035, partial [Arcobacter sp. F155] | diamond | 210 | 136 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter sp. F155 | ||
| 29508517 | 29508517 | PRJNA498309_P_NODE_88290_length_225_cov_1.595745_g86141_i0 | PRJNA498309 | 88290 | 225 | 1.595745 | 3.59042625 | Helicobacter pylori | 210 | Bacteria | Bacteria | 54.7 | 9.49e-8 | NR | GAA6953508.1 | 210 | g86141 | i0 | 85.7 | 0.373333333333333 | 28 | 4 | 37.3 | 0 | 81 | 164 | 14 | 41 | GAA6953508.1 hypothetical protein Kyoto211A_0720 [Helicobacter pylori] | diamond | 84 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29508520 | 29508520 | PRJNA498309_P_NODE_97530_length_200_cov_1.895706_g95381_i0 | PRJNA498309 | 97530 | 200 | 1.895706 | 3.791412 | Helicobacter pylori | 210 | Bacteria | Bacteria | 51.6 | 1.05e-5 | NR | GAA9038731.1 | 210 | g95381 | i0 | 77.4 | 2.07 | 31 | 7 | 46.5 | 0 | 59 | 151 | 74 | 104 | GAA9038731.1 hypothetical protein Kyoto184A_01380 [Helicobacter pylori] | diamond | 414 | 51.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29950721 | 29950721 | PRJNA498309_P_NODE_98951_length_196_cov_5.188679_g96802_i0 | PRJNA498309 | 98951 | 196 | 5.188679 | 10.16981084 | Campylobacterota bacterium | 2026809 | Bacteria | Bacteria | 54.7 | 1.19e-6 | NR | MRJ06679.1 | 2026809 | g96802 | i0 | 59.1 | 1.3469387755102 | 44 | 17 | 67.3 | 1 | 134 | 3 | 40 | 82 | MRJ06679.1 damage-inducible protein [Campylobacterota bacterium] | diamond | 264 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Campylobacterota bacterium | ||||||
| 30123928 | 30123928 | PRJNA498309_P_NODE_29752_length_521_cov_640.774793_g27763_i0 | PRJNA498309 | 29752 | 521 | 640.774793 | 3338.43667153 | Bacteria | 2 | Bacteria | Bacteria | 69.7 | 7.64e-12 | NR | MDU9799813.1 | 210 | g27763 | i0 | 96.8 | 0.35700575815739 | 31 | 1 | 17.9 | 0 | 370 | 462 | 1 | 31 | MDU9799813.1 hypothetical protein [Helicobacter pylori] | diamond | 186 | 69.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30772265 | 30772265 | PRJNA498309_P_NODE_104654_length_183_cov_73.780822_g102505_i0 | PRJNA498309 | 104654 | 183 | 73.780822 | 135.01890426 | Helicobacter pylori | 210 | Bacteria | Bacteria | 75.5 | 2.11e-16 | NR | GAA8992952.1 | 210 | g102505 | i0 | 83.7 | 0.704918032786885 | 43 | 7 | 70.5 | 0 | 176 | 48 | 1 | 43 | GAA8992952.1 hypothetical protein BTM273_15270 [Helicobacter pylori] | diamond | 129 | 75.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 31340984 | 31340984 | PRJNA498309_P_NODE_104436_length_184_cov_1.795918_g102287_i0 | PRJNA498309 | 104436 | 184 | 1.795918 | 3.30448912 | Arcobacter sp. F155 | 2044512 | Bacteria | Bacteria | 86.7 | 7.57e-20 | NR | RXJ75072.1 | 2044512 | g102287 | i0 | 100 | 1.67934782608696 | 43 | 0 | 70.1 | 0 | 184 | 56 | 101 | 143 | RXJ75072.1 hypothetical protein CRV03_14035, partial [Arcobacter sp. F155] | diamond | 309 | 86.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter sp. F155 | ||
| 31657152 | 31657152 | PRJNA498309_S_NODE_47917_length_174_cov_1.726619_g45749_i0 | PRJNA498309 | 47917 | 174 | 1.726619 | 3.00431706 | Helicobacter saguini | 1548018 | Bacteria | Bacteria | 64.3 | 2.06e-10 | NR | MWV62424.1 | 1548018 | g45749 | i0 | 71.8 | 4.56896551724138 | 39 | 11 | 67.2 | 0 | 118 | 2 | 105 | 143 | MWV62424.1 NgoFVII family restriction endonuclease [Helicobacter saguini] | diamond | 795 | 64.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter saguini | ||
| 31815413 | 31815413 | PRJNA498309_P_NODE_56117_length_345_cov_3.220779_g53969_i0 | PRJNA498309 | 56117 | 345 | 3.220779 | 11.11168755 | Aliarcobacter cibarius | 255507 | Bacteria | Bacteria | 63.5 | 4.52e-9 | NR | WP_024774462.1 | 255507 | g53969 | i0 | 60.9 | 0.808695652173913 | 46 | 18 | 40 | 0 | 165 | 28 | 4 | 49 | WP_024774462.1 glycosyltransferase family 2 protein [Aliarcobacter cibarius] | diamond | 279 | 63.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cibarius | ||
| 32163620 | 32163620 | PRJNA498309_P_NODE_26618_length_556_cov_5.206166_g24660_i0 | PRJNA498309 | 26618 | 556 | 5.206166 | 28.94628296 | Helicobacter pylori | 210 | Bacteria | Bacteria | 53.1 | 2.84e-5 | NR | GAA9253219.1 | 210 | g24660 | i0 | 100 | 0.107913669064748 | 20 | 0 | 10.8 | 0 | 504 | 445 | 40 | 59 | GAA9253219.1 hypothetical protein Kyoto199A_2630 [Helicobacter pylori] | diamond | 60 | 53.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32480085 | 32480085 | PRJNA498309_S_NODE_25959_length_354_cov_29.169279_g23791_i0 | PRJNA498309 | 25959 | 354 | 29.169279 | 103.25924766 | Helicobacter pylori | 210 | Bacteria | Bacteria | 84.3 | 3.94e-19 | NR | GAA8838853.1 | 210 | g23791 | i0 | 92.9 | 0.355932203389831 | 42 | 3 | 35.6 | 0 | 349 | 224 | 2 | 43 | GAA8838853.1 hypothetical protein Kyoto149A_5200 [Helicobacter pylori] | diamond | 126 | 84.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 32495534 | 32495534 | PRJNA498309_P_NODE_33859_length_484_cov_3.821029_g31823_i0 | PRJNA498309 | 33859 | 484 | 3.821029 | 18.49378036 | root | 1 | Root_unresolved | Root_unresolved | 72 | 2.37e-13 | NR | GAA9174405.1 | 210 | g31823 | i0 | 63.8 | 1.78512396694215 | 58 | 21 | 36 | 0 | 310 | 483 | 11 | 68 | GAA9174405.1 hypothetical protein Kyoto190A_6010 [Helicobacter pylori] | diamond | 864 | 72.4 | 0.994475138121547 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;