RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA498309", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA498309 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
481306 481306 PRJNA498309_P_NODE_74221_length_270_cov_3.377682_g72072_i0 PRJNA498309 74221 270 3.377682 9.1197414 Spizellomyces punctatus 109760 Fungi Fungi 56.5 0.002   NTclustered gi|1027028008|ref|XM_016756790.1| 645134 g72072 i0 94.444 0.133333333333333 36 2 13 0 23 58 493 528 Spizellomyces punctatus DAOM BR117 histone H3 (SPPG_08644), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
15783376 15783376 PRJNA498309_P_NODE_40093_length_436_cov_37.298246_g37987_i0 PRJNA498309 40093 436 37.298246 162.62035256 Spizellomyces punctatus 109760 Fungi Fungi 298 4.9e-76   NTclustered gi|1027005164|ref|XM_016754649.1| 645134 g37987 i0 84.076 39.7064220183486 314 44 71 6 85 395 460 150 Spizellomyces punctatus DAOM BR117 60S ribosomal protein L44 (SPPG_06444), mRNA blastn 17312 298 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
19606110 19606110 PRJNA498309_P_NODE_117196_length_159_cov_2.901639_g115047_i0 PRJNA498309 117196 159 2.901639 4.61360601 Spizellomyces punctatus 109760 Fungi Fungi 54.7 0.004   NTclustered gi|1026947804|ref|XM_016748426.1| 645134 g115047 i0 100 0.182389937106918 29 0 18 0 43 71 760 788 Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_00089), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
26697081 26697081 PRJNA498309_P_NODE_59821_length_328_cov_8.106529_g57673_i0 PRJNA498309 59821 328 8.106529 26.58941512 Thoreauomyces humboldtii 1396496 Fungi Fungi 67 3.02e-10   NR KAJ3013248.1 1396496 g57673 i0 75.6 0.375 41 10 37.5 0 22 144 559 599 KAJ3013248.1 Dihydroxyacetone kinase 2 [Thoreauomyces humboldtii] diamond 123 67 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Thoreauomyces Thoreauomyces humboldtii
28277011 28277011 PRJNA498309_P_NODE_18506_length_678_cov_10.942278_g16738_i0 PRJNA498309 18506 678 10.942278 74.18864484 Siphonaria sp. JEL 2047469 Fungi Fungi 122 9.909999999999998e-31   NR KAJ3027592.1 2723227 g16738 i0 45.3 0.606194690265487 137 75 60.6 0 165 575 10 146 KAJ3027592.1 hypothetical protein HDU68_003525 [Siphonaria sp. JEL0065] diamond 411 122 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Siphonaria Siphonaria sp. JEL0065
28435135 28435135 PRJNA498309_P_NODE_72226_length_277_cov_3.866667_g70077_i0 PRJNA498309 72226 277 3.866667 10.71066759 Phlyctochytrium arcticum 1117335 Fungi Fungi 72.8 1.52e-12   NR KAI9100368.1 1117335 g70077 i0 41.6 0.963898916967509 89 48 95.3 2 4 267 506 591 KAI9100368.1 hypothetical protein DFS34DRAFT_592273 [Phlyctochytrium arcticum] diamond 267 72.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium arcticum
30740503 30740503 PRJNA498309_P_NODE_74274_length_270_cov_2.502146_g72125_i0 PRJNA498309 74274 270 2.502146 6.7557942 Powellomyces hirtus 109895 Fungi Fungi 73.2 9.14e-14   NR TPX57767.1 109895 g72125 i0 60.8 0.566666666666667 51 20 56.7 0 248 96 126 176 TPX57767.1 hypothetical protein PhCBS80983_g03586 [Powellomyces hirtus] diamond 153 73.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Powellomyces Powellomyces hirtus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;