RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA498309", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA498309 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4308298 4308298 PRJNA498309_P_NODE_85664_length_232_cov_16.979487_g83515_i0 PRJNA498309 85664 232 16.979487 39.39240984 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 213 8.99e-51   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g83515 i0 85.577 125.685344827586 208 25 88 4 28 232 5031565 5031770 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 29159 213 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
15783558 15783558 PRJNA498309_P_NODE_50333_length_374_cov_14.495549_g48187_i0 PRJNA498309 50333 374 14.495549 54.21335326 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 351 3.13e-92   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g48187 i0 86.585 121.933155080214 328 33 86 9 18 339 5031231 5031553 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 45603 351 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
20883435 20883435 PRJNA498309_P_NODE_86337_length_230_cov_15.015544_g84188_i0 PRJNA498309 86337 230 15.015544 34.5357512 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 235 1.9e-57   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g84188 i0 87.324 90.8217391304348 213 18 90 5 1 207 5033100 5032891 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 20889 235 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;