contig_metadata
12 rows where bioproject = "PRJNA498309", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9410167 | 9410167 | PRJNA498309_S_NODE_24628_length_374_cov_197.882006_g22462_i0 | PRJNA498309 | 24628 | 374 | 197.882006 | 740.07870244 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 383 | 1.1099999999999998e-101 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g22462 | i0 | 88.818 | 96.8930481283422 | 313 | 34 | 85 | 1 | 23 | 335 | 654244 | 653933 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 36238 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 17057955 | 17057955 | PRJNA498309_P_NODE_32234_length_498_cov_14.585683_g30216_i0 | PRJNA498309 | 32234 | 498 | 14.585683 | 72.63670134 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 243 | 2.3299999999999993e-74 | NR | MES2200101.1 | 2081524 | g30216 | i0 | 94.5 | 0.771084337349398 | 128 | 7 | 77.1 | 0 | 22 | 405 | 475 | 602 | MES2200101.1 toprim domain-containing protein [Chlamydiota bacterium] | diamond | 384 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 27882173 | 27882173 | PRJNA498309_P_NODE_87405_length_227_cov_4.694737_g85256_i0 | PRJNA498309 | 87405 | 227 | 4.694737 | 10.65705299 | Bacteria | 2 | Bacteria | Bacteria | 66.6 | 1.14e-10 | NR | MFI5333742.1 | 2047757 | g85256 | i0 | 88.6 | 5.55066079295154 | 35 | 4 | 46.3 | 0 | 7 | 111 | 304 | 338 | MFI5333742.1 heavy metal translocating P-type ATPase [Chlamydiales bacterium] | diamond | 1260 | 67 | 0.994029850746269 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 28056068 | 28056068 | PRJNA498309_P_NODE_78605_length_255_cov_1.908257_g76456_i0 | PRJNA498309 | 78605 | 255 | 1.908257 | 4.86605535 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 110 | 1.9000000000000003e-28 | NR | MBX9924700.1 | 2047756 | g76456 | i0 | 86.4 | 1.55294117647059 | 66 | 9 | 77.6 | 0 | 228 | 31 | 122 | 187 | MBX9924700.1 elongation factor P [Rhabdochlamydiaceae bacterium] | diamond | 396 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 28182196 | 28182196 | PRJNA498309_P_NODE_106746_length_179_cov_1.922535_g104597_i0 | PRJNA498309 | 106746 | 179 | 1.922535 | 3.44133765 | Simkania sp. | 34094 | Bacteria | Bacteria | 98.2 | 2.32e-22 | NR | MBS3905183.1 | 34094 | g104597 | i0 | 81.4 | 0.988826815642458 | 59 | 11 | 98.9 | 0 | 179 | 3 | 50 | 108 | MBS3905183.1 tyrosine transporter [Simkania sp.] | diamond | 177 | 98.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 28340313 | 28340313 | PRJNA498309_P_NODE_35046_length_474_cov_6.379863_g32999_i0 | PRJNA498309 | 35046 | 474 | 6.379863 | 30.24055062 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 191 | 5.559999999999999e-54 | NR | MEN9344352.1 | 2081524 | g32999 | i0 | 59.3 | 0.917721518987342 | 145 | 59 | 91.8 | 0 | 23 | 457 | 556 | 700 | MEN9344352.1 Cyclohexadienyl dehydratase [Chlamydiota bacterium] | diamond | 435 | 191 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 28656174 | 28656174 | PRJNA498309_P_NODE_93827_length_209_cov_2.691860_g91678_i0 | PRJNA498309 | 93827 | 209 | 2.69186 | 5.6259874 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 88.6 | 5.21e-19 | NR | MBX9922815.1 | 2047756 | g91678 | i0 | 61.3 | 0.889952153110048 | 62 | 24 | 89 | 0 | 209 | 24 | 184 | 245 | MBX9922815.1 hypothetical protein [Rhabdochlamydiaceae bacterium] | diamond | 186 | 88.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 29476648 | 29476648 | PRJNA498309_P_NODE_29890_length_520_cov_3.594203_g27898_i0 | PRJNA498309 | 29890 | 520 | 3.594203 | 18.6898556 | Candidatus Neptunochlamydia vexilliferae | 1651774 | Bacteria | Bacteria | 155 | 1.2e-42 | NR | WP_194847292.1 | 1651774 | g27898 | i0 | 58.1 | 0.715384615384615 | 124 | 52 | 71.5 | 0 | 436 | 65 | 1 | 124 | WP_194847292.1 TauD/TfdA family dioxygenase [Candidatus Neptunochlamydia vexilliferae] | diamond | 372 | 155 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Neptunichlamydia | Candidatus Neptunichlamydia vexilliferae | |
| 30013961 | 30013961 | PRJNA498309_P_NODE_85991_length_232_cov_1.179487_g83842_i0 | PRJNA498309 | 85991 | 232 | 1.179487 | 2.73640984 | Simkania sp. | 34094 | Bacteria | Bacteria | 105 | 1.95e-24 | NR | MBS3905114.1 | 34094 | g83842 | i0 | 74 | 0.943965517241379 | 73 | 19 | 94.4 | 0 | 1 | 219 | 513 | 585 | MBS3905114.1 UvrD-helicase domain-containing protein [Simkania sp.] | diamond | 219 | 105 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 30582326 | 30582326 | PRJNA498309_P_NODE_116693_length_160_cov_2.512195_g114544_i0 | PRJNA498309 | 116693 | 160 | 2.512195 | 4.019512 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 42.4 | 0.0168 | NR | HRD56306.1 | 2052176 | g114544 | i0 | 58.3 | 2.75625 | 36 | 15 | 67.5 | 0 | 46 | 153 | 1 | 36 | HRD56306.1 type II secretion system F family protein [Parachlamydiaceae bacterium] | diamond | 441 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 31214029 | 31214029 | PRJNA498309_P_NODE_79195_length_253_cov_2.087963_g77046_i0 | PRJNA498309 | 79195 | 253 | 2.087963 | 5.28254639 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 111 | 2.31e-26 | NR | MBY0529427.1 | 2047756 | g77046 | i0 | 82.6 | 0.818181818181818 | 69 | 12 | 81.8 | 0 | 3 | 209 | 472 | 540 | MBY0529427.1 chaperonin GroEL [Rhabdochlamydiaceae bacterium] | diamond | 207 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 31562672 | 31562672 | PRJNA498309_S_NODE_52216_length_157_cov_2.139344_g50048_i0 | PRJNA498309 | 52216 | 157 | 2.139344 | 3.35877008 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 54.7 | 5.38e-7 | NR | MBP7074579.1 | 2047756 | g50048 | i0 | 59.5 | 1.64331210191083 | 42 | 17 | 80.3 | 0 | 155 | 30 | 194 | 235 | MBP7074579.1 ABC-2 family transporter protein [Rhabdochlamydiaceae bacterium] | diamond | 258 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;