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contig_metadata

8 rows where bioproject = "PRJNA498309", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 8 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 8 ✖

bioproject 1

  • PRJNA498309 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24706793 24706793 PRJNA498309_P_NODE_47020_length_393_cov_2.314607_g44884_i0 PRJNA498309 47020 393 2.314607 9.09640551 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 159 2.71e-47   NR MBI3253095.1 2035772 g44884 i0 72.2 1.61068702290076 108 30 82.4 0 69 392 5 112 MBI3253095.1 dUTP diphosphatase [Candidatus Omnitrophota bacterium] diamond 633 159 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26728407 26728407 PRJNA498309_P_NODE_22361_length_612_cov_3.572174_g20490_i0 PRJNA498309 22361 612 3.572174 21.86170488 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.5 1.57e-4   NR MBI3999788.1 2035772 g20490 i0 45.1 0.78921568627451 71 38 34.3 1 599 390 191 261 MBI3999788.1 GT4 family glycosyltransferase PelF [Candidatus Omnitrophota bacterium] diamond 483 53.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27045454 27045454 PRJNA498309_P_NODE_61682_length_320_cov_3.070671_g59534_i0 PRJNA498309 61682 320 3.070671 9.8261472 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 69.7 1.51e-12   NR MCG3177184.1 2035772 g59534 i0 76.3 0.35625 38 9 35.6 0 205 318 9 46 MCG3177184.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 114 69.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27961433 27961433 PRJNA498309_P_NODE_40505_length_433_cov_8.717172_g38398_i0 PRJNA498309 40505 433 8.717172 37.74535476 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 63.9 4.51e-9   NR MBI4342659.1 2035772 g38398 i0 51.6 0.443418013856813 64 31 44.3 0 218 27 1 64 MBI4342659.1 response regulator [Candidatus Omnitrophota bacterium] diamond 192 63.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28797645 28797645 PRJNA498309_P_NODE_35027_length_474_cov_13.787185_g32980_i0 PRJNA498309 35027 474 13.787185 65.3512569 PVC group 1783257 Bacteria Bacteria 140 1.4499999999999998e-37   NR MBI4971073.1 2035772 g32980 i0 70 3.34810126582278 100 30 63.3 0 16 315 47 146 MBI4971073.1 TerC family protein [Candidatus Omnitrophota bacterium] diamond 1587 140 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29035171 29035171 PRJNA498309_P_NODE_68068_length_293_cov_2.910156_g65919_i0 PRJNA498309 68068 293 2.910156 8.52675708 Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_ 2035772 Bacteria Bacteria 128 6.409999999999999e-32   NR PIQ85056.1 1974748 g65919 i0 64.4 0.921501706484642 90 31 92.2 1 291 22 537 625 PIQ85056.1 MAG: cytochrome-c oxidase [Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26] diamond 270 128 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Abzuiibacterium Candidatus Abzuiibacterium crystallinum
29161495 29161495 PRJNA498309_P_NODE_6689_length_1225_cov_5.050505_g5475_i0 PRJNA498309 6689 1225 5.050505 61.86868625 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.4 1.43e-4   NR MBU3759795.1 2035772 g5475 i0 66.7 0.230204081632653 30 10 7.3 0 1129 1218 18 47 MBU3759795.1 GIY-YIG nuclease family protein [Candidatus Omnitrophota bacterium] diamond 282 52.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30550852 30550852 PRJNA498309_P_NODE_35753_length_469_cov_2.231481_g33700_i0 PRJNA498309 35753 469 2.231481 10.46564589 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 243 2.09e-71   NR RJO64321.1 2035772 g33700 i0 82.6 0.953091684434968 149 26 95.3 0 468 22 451 599 RJO64321.1 MAG: DNA polymerase III subunit alpha [Candidatus Omnitrophota bacterium] diamond 447 243 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;