RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA498309", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA498309 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28940410 28940410 PRJNA498309_P_NODE_20508_length_640_cov_17.253731_g18677_i0 PRJNA498309 20508 640 17.253731 110.4238784 Fidelibacterota bacterium 2026760 Bacteria Bacteria 94.7 2.07e-18   NR MCF7835797.1 2026760 g18677 i0 50.9 0.515625 110 41 47.8 4 618 313 885 989 MCF7835797.1 Eco57I restriction-modification methylase domain-containing protein [Fidelibacterota bacterium] diamond 330 94.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31467690 31467690 PRJNA498309_P_NODE_101496_length_190_cov_5.032680_g99347_i0 PRJNA498309 101496 190 5.03268 9.562092 Fidelibacterota bacterium 2026760 Bacteria Bacteria 44.3 0.00514   NR MCF7835795.1 2026760 g99347 i0 48 0.789473684210526 50 23 75.8 2 9 152 501 549 MCF7835795.1 right-handed parallel beta-helix repeat-containing protein [Fidelibacterota bacterium] diamond 150 44.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;