RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA498309", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA498309 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28624708 28624708 PRJNA498309_P_NODE_74727_length_268_cov_7.207792_g72578_i0 PRJNA498309 74727 268 7.207792 19.31688256 Balneolales bacterium 2497613 Bacteria Bacteria 43.1 0.0389   NR MEX2632763.1 2497613 g72578 i0 41.5 0.917910447761194 82 35 85.1 3 20 247 1261 1335 MEX2632763.1 invasin domain 3-containing protein [Balneolales bacterium] diamond 246 43.1 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
31594261 31594261 PRJNA498309_P_NODE_98176_length_198_cov_5.012422_g96027_i0 PRJNA498309 98176 198 5.012422 9.92459556 Balneolaceae bacterium 2053516 Bacteria Bacteria 88.2 9.37e-19   NR MFA5669914.1 2053516 g96027 i0 75.9 0.818181818181818 54 13 81.8 0 34 195 38 91 MFA5669914.1 hypothetical protein [Balneolaceae bacterium] diamond 162 88.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
32621660 32621660 PRJNA498309_P_NODE_57720_length_338_cov_2.053156_g55572_i0 PRJNA498309 57720 338 2.053156 6.93966728 Pseudomonadati 3379134 Bacteria Bacteria 103 1.0799999999999999e-23   NR MDZ7691776.1 2053516 g55572 i0 46.1 1.81065088757396 102 55 90.5 0 32 337 2 103 MDZ7691776.1 hypothetical protein [Balneolaceae bacterium] diamond 612 104 0.990384615384615 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;