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contig_metadata

17 rows where bioproject = "PRJNA498309" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 17 ✖

bioproject 1

  • PRJNA498309 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
480141 480141 PRJNA498309_P_NODE_111481_length_170_cov_1.406015_g109332_i0 PRJNA498309 111481 170 1.406015 2.3902255 soil amoeba AND9 328341 Heterolobosea other_Eukaryota 302 1.28e-77   NTclustered gi|65306218|gb|AY965861.1| 328341 g109332 i0 98.824 85.2529411764706 170 0 100 2 1 170 1491 1658 Soil amoeba AND9 18S ribosomal RNA gene, partial sequence blastn 14493 302 1 Eukaryota Discoba   Heterolobosea         soil amoeba AND9
481213 481213 PRJNA498309_P_NODE_66941_length_297_cov_46.623077_g64793_i0 PRJNA498309 66941 297 46.623077 138.47053869 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 283 8.989999999999999e-72   NTclustered gi|2031941688|emb|OD957957.1| 5763 g64793 i0 93.651 0.636363636363636 189 12 64 0 109 297 323 135 Naegleria fowleri Karachi_NF001 strain blastn 189 283 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
1756999 1756999 PRJNA498309_S_NODE_19182_length_475_cov_105.318182_g17090_i0 PRJNA498309 19182 475 105.318182 500.2613645 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 603 1.02e-167   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g17090 i0 91.629 136.701052631579 442 28 91 7 1 434 4364 4804 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 64933 603 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
1757657 1757657 PRJNA498309_S_NODE_50022_length_165_cov_2.861538_g47854_i0 PRJNA498309 50022 165 2.861538 4.7215377 Neobodo designis 312471 Euglenozoa other_Eukaryota 289 9.66e-74   NTclustered gi|225216795|gb|FJ176710.1| 312471 g47854 i0 98.182 142.115151515152 165 3 100 0 1 165 1070 906 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 23449 289 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
10685128 10685128 PRJNA498309_P_NODE_83549_length_239_cov_2.509901_g81400_i0 PRJNA498309 83549 239 2.509901 5.99866339 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 130 9.65e-26   NTclustered gi|2031941093|emb|OD957822.1| 5763 g81400 i0 78.365 3.48117154811716 208 39 87 2 1 207 62 264 Naegleria fowleri Karachi_NF001 strain blastn 832 130 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
11312426 11312426 PRJNA498309_P_NODE_93429_length_210_cov_3.080925_g91280_i0 PRJNA498309 93429 210 3.080925 6.4699425 Herpetomonas 5714 Euglenozoa other_Eukaryota 355 1.25e-93   NTclustered gi|407188030|gb|JQ359731.1| 5718 g91280 i0 97.156 96.3904761904762 211 5 100 1 1 210 1422 1212 Herpetomonas muscarum isolate TCC001E 18S ribosomal RNA gene, partial sequence blastn 20242 355 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum
11960000 11960000 PRJNA498309_P_NODE_71090_length_281_cov_37.913934_g68941_i0 PRJNA498309 71090 281 37.913934 106.53815454 Dinema validum 2704078 Euglenozoa other_Eukaryota 54.7 0.007   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g68941 i0 100 0.103202846975089 29 0 10 0 1 29 8 36 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 29 54.7 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
15783009 15783009 PRJNA498309_P_NODE_20073_length_648_cov_13.119476_g18259_i0 PRJNA498309 20073 648 13.119476 85.01420448 Acrasis kona 1008807 Heterolobosea other_Eukaryota 109 1.41e-24   NR KAL0478636.1 1008807 g18259 i0 51.6 1.13888888888889 122 55 55.6 3 48 407 169 288 KAL0478636.1 hypothetical protein AKO1_005035 [Acrasis kona] diamond 738 109 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
15784044 15784044 PRJNA498309_P_NODE_82153_length_244_cov_1.120773_g80004_i0 PRJNA498309 82153 244 1.120773 2.73468612 Paravahlkampfia ustiana 166958 Heterolobosea other_Eukaryota 440 4.019999999999999e-119   NTclustered gi|1121487417|gb|KX068999.1| 166958 g80004 i0 99.18 12.8155737704918 244 2 100 0 1 244 739 982 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 3127 440 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
17057353 17057353 PRJNA498309_P_NODE_101454_length_190_cov_29.209150_g99305_i0 PRJNA498309 101454 190 29.20915 55.497385 Dinema validum 2704078 Euglenozoa other_Eukaryota 56.5 0.001   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g99305 i0 100 0.157894736842105 30 0 16 0 158 187 30 1 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 30 56.5 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
17059544 17059544 PRJNA498309_S_NODE_32154_length_277_cov_2.396694_g29986_i0 PRJNA498309 32154 277 2.396694 6.63884238 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 198 3.09e-46   NTclustered gi|1002433688|ref|XR_001548756.1| 157538 g29986 i0 83.945 80.9783393501805 218 24 77 10 1 212 52 264 Leptomonas pyrrhocoris 28S ribosomal RNA (LSU-beta) rRNA blastn 22431 198 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
19606870 19606870 PRJNA498309_P_NODE_51116_length_370_cov_27.534535_g48969_i0 PRJNA498309 51116 370 27.534535 101.8777795 Dinema validum 2704078 Euglenozoa other_Eukaryota 52.8 0.035   NTclustered gi|1803019085|gb|MT007857.1| 2704078 g48969 i0 100 0.0756756756756757 28 0 8 0 1 28 8 35 Dinema validum isolate AB2_2 small subunit ribosomal RNA gene, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Dinema Dinema validum
20236104 20236104 PRJNA498309_S_NODE_38296_length_224_cov_1.814815_g36128_i0 PRJNA498309 38296 224 1.814815 4.0651856 root 1 Root_unresolved Root_unresolved 75 4.25e-9   NTclustered gi|2031934279|emb|OD956844.1| 5763 g36128 i0 95.745 13.8482142857143 47 1 21 1 1 47 3241 3286 Naegleria fowleri Karachi_NF001 strain blastn 3102 75 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20882964 20882964 PRJNA498309_P_NODE_55277_length_349_cov_6.525641_g53129_i0 PRJNA498309 55277 349 6.525641 22.77448709 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 152 3.1599999999999997e-32   NTclustered gi|24286545|gb|AY147905.1| 5698 g53129 i0 77.912 2.75358166189112 249 51 71 4 66 312 400 154 Trypanosoma rangeli histone H2A genomic DNA cluster, partial sequence blastn 961 152 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
22157531 22157531 PRJNA498309_P_NODE_46618_length_395_cov_5.726257_g44482_i0 PRJNA498309 46618 395 5.726257 22.61871515 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 614 3.839999999999999e-171   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g44482 i0 99.123 69.7113924050633 342 2 86 1 23 363 2720 3061 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27536 614 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25335410 25335410 PRJNA498309_P_NODE_64200_length_309_cov_1.849265_g62052_i0 PRJNA498309 64200 309 1.849265 5.71422885 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 505 1.8399999999999998e-138   NTclustered gi|11037201|gb|AF208879.1|AF208879 140242 g62052 i0 96.117 159.116504854369 309 12 100 0 1 309 656 964 Cruzella marina large subunit ribosomal RNA gene, partial sequence blastn 49167 508 0.99409448818897606 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cruzella Cruzella marina
32794923 32794923 PRJNA498309_P_NODE_88400_length_224_cov_6.085561_g86251_i0 PRJNA498309 88400 224 6.085561 13.63165664 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 68.6 1.59e-11   NR XP_015654710.1 157538 g86251 i0 64.1 1.04464285714286 39 13 52.2 1 208 92 275 312 XP_015654710.1 putative mitochondrial hypothetical protein [Leptomonas pyrrhocoris] diamond 234 68.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;