RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA498309", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA498309 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13863184 13863184 PRJNA498309_S_NODE_22171_length_415_cov_3.123684_g20037_i0 PRJNA498309 22171 415 3.123684 12.9632886 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 234 3.3499999999999995e-72   NR MEA2647782.1 2785449 g20037 i0 86.4 0.95421686746988 132 18 95.4 0 415 20 83 214 MEA2647782.1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit [Candidatus Binataceae bacterium] diamond 396 234 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
14509119 14509119 PRJNA498309_P_NODE_19672_length_656_cov_2.933764_g17877_i0 PRJNA498309 19672 656 2.933764 19.24549184 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 228 4.06e-69   NR HTW88704.1 2785449 g17877 i0 69.6 0.676829268292683 148 45 67.7 0 87 530 6 153 HTW88704.1 Rieske 2Fe-2S domain-containing protein [Candidatus Binataceae bacterium] diamond 444 228 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
32163608 32163608 PRJNA498309_P_NODE_104338_length_184_cov_2.224490_g102189_i0 PRJNA498309 104338 184 2.22449 4.0930616 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 109 2.63e-26   NR MEA2647782.1 2785449 g102189 i0 86.9 0.994565217391304 61 8 99.5 0 2 184 144 204 MEA2647782.1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit [Candidatus Binataceae bacterium] diamond 183 109 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
32195168 32195168 PRJNA498309_S_NODE_22458_length_410_cov_2.941333_g20320_i0 PRJNA498309 22458 410 2.941333 12.0594653 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 169 7.67e-48   NR HTW88704.1 2785449 g20320 i0 75 0.760975609756098 104 26 76.1 0 99 410 6 109 HTW88704.1 Rieske 2Fe-2S domain-containing protein [Candidatus Binataceae bacterium] diamond 312 169 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;