RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA495917" and tax_superkingdom = "Archaea"

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tax_phylum 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA495917 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27298302 27298302 PRJNA495917_S_NODE_3903_length_250_cov_1.302326_g3709_i0 PRJNA495917 3903 250 1.302326 3.255815 Nitrososphaera sp. 1971748 Archaea Archaea 69.7 1.3e-11   NR MCI0562002.1 1971748 g3709 i0 51.5 0.816 68 33 81.6 0 223 20 116 183 MCI0562002.1 hypothetical protein [Nitrososphaera sp.] diamond 204 69.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32321963 32321963 PRJNA495917_S_NODE_5219_length_221_cov_1.672043_g5025_i0 PRJNA495917 5219 221 1.672043 3.69521503 Ignisphaera sp. 2268142 Archaea Archaea 47 3.07e-4   NR MCI4436266.1 2268142 g5025 i0 60 0.475113122171946 35 14 47.5 0 106 2 1 35 MCI4436266.1 hypothetical protein [Ignisphaera sp.] diamond 105 47 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;