RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA495917" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA495917 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19603536 19603536 PRJNA495917_S_NODE_9696_length_176_cov_3.312057_g9502_i0 PRJNA495917 9696 176 3.312057 5.82922032 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g9502 i0 100 0.335227272727273 30 0 17 0 99 128 8495871 8495842 Anemonia sulcata genome assembly, chromosome: 10 blastn 59 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
29713102 29713102 PRJNA495917_S_NODE_4310_length_239_cov_11.862745_g4116_i0 PRJNA495917 4310 239 11.862745 28.35196055 root 1 Root_unresolved Root_unresolved 44.7 0.00739   NR PFX21664.1 50429 g4116 i0 42.2 1.02928870292887 45 26 56.5 0 186 52 230 274 PFX21664.1 hypothetical protein AWC38_SpisGene13848 [Stylophora pistillata] diamond 246 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;