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contig_metadata

19 rows where bioproject = "PRJNA495917" and tax_clade = "Sar"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA495917 · 19 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
477573 477573 PRJNA495917_S_NODE_5621_length_214_cov_5.089385_g5427_i0 PRJNA495917 5621 214 5.089385 10.8912839 Heterococcus caespitosus 55585 SAR_Eukaryotes SAR_Eukaryotes 340 3.59e-89   NTclustered gi|157411020|gb|EF990191.1| 55585 g5427 i0 95.755 98.714953271028 212 8 99 1 3 214 1201 991 Heterococcus caespitosus large subunit ribosomal RNA gene, partial sequence blastn 21125 340 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae Heterococcus Heterococcus caespitosus
1752372 1752372 PRJNA495917_S_NODE_10842_length_170_cov_5.237037_g10648_i0 PRJNA495917 10842 170 5.237037 8.9029629 Heterococcus caespitosus 55585 SAR_Eukaryotes SAR_Eukaryotes 276 7.75e-70   NTclustered gi|157411020|gb|EF990191.1| 55585 g10648 i0 95.906 84.6058823529412 171 5 100 2 1 170 2564 2395 Heterococcus caespitosus large subunit ribosomal RNA gene, partial sequence blastn 14383 276 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae Heterococcus Heterococcus caespitosus
1752411 1752411 PRJNA495917_S_NODE_12862_length_161_cov_5.301587_g12668_i0 PRJNA495917 12862 161 5.301587 8.53555507 Heterococcus caespitosus 55585 SAR_Eukaryotes SAR_Eukaryotes 255 9.5e-64   NTclustered gi|157411020|gb|EF990191.1| 55585 g12668 i0 95.652 99.3105590062112 161 4 100 2 1 161 1405 1248 Heterococcus caespitosus large subunit ribosomal RNA gene, partial sequence blastn 15989 255 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae Heterococcus Heterococcus caespitosus
3659160 3659160 PRJNA495917_S_NODE_9463_length_178_cov_1.174825_g9269_i0 PRJNA495917 9463 178 1.174825 2.0911885 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 313 6.259999999999999e-81   NTclustered gi|1238675774|gb|MF783088.1| 4784 g9269 i0 100 94.9438202247191 169 0 95 0 1 169 927 759 Phytophthora capsici isolate CACAO small subunit ribosomal RNA gene, partial sequence blastn 16900 313 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
6855113 6855113 PRJNA495917_S_NODE_1546_length_384_cov_17.584527_g1352_i0 PRJNA495917 1546 384 17.584527 67.52458368 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 350 1.1600000000000001e-91   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1352 i0 85.112 43.5755208333333 356 38 91 11 36 384 4039 3692 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 16733 350 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
8130593 8130593 PRJNA495917_S_NODE_3107_length_278_cov_6.493827_g2913_i0 PRJNA495917 3107 278 6.493827 18.05283906 Tribonema sp. 2679974 SAR_Eukaryotes SAR_Eukaryotes 307 4.95e-79   NTclustered gi|2518133535|gb|OQ243223.1| 2679974 g2913 i0 86.972 50.7553956834532 284 23 99 8 1 275 5886 6164 Tribonema sp. strain GXU-A10 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and 28S-18S ribosomal RNA intergenic spacer, complete sequence blastn 14110 307 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema sp.
8130624 8130624 PRJNA495917_S_NODE_5247_length_220_cov_12.210811_g5053_i0 PRJNA495917 5247 220 12.210811 26.8637842 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 285 1.7599999999999998e-72   NTclustered gi|238617605|gb|FJ973380.1| 45107 g5053 i0 89.912 37.8227272727273 228 14 99 4 1 219 1654 1881 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 8321 285 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
9405406 9405406 PRJNA495917_S_NODE_14388_length_156_cov_3.950413_g14194_i0 PRJNA495917 14388 156 3.950413 6.16264428 Mischococcus sphaerocephalus 55587 SAR_Eukaryotes SAR_Eukaryotes 289 9e-74   NTclustered gi|4106430|gb|AF083400.1|AF083400 55587 g14194 i0 100 99.2692307692308 156 0 100 0 1 156 1479 1634 Mischococcus sphaerocephalus 18S small subunit ribosomal RNA gene, partial sequence blastn 15486 289 1 Eukaryota Sar     Xanthophyceae Mischococcales Mischococcaceae Mischococcus Mischococcus sphaerocephalus
9405407 9405407 PRJNA495917_S_NODE_14408_length_156_cov_2.743802_g14214_i0 PRJNA495917 14408 156 2.743802 4.28033112 Peronospora boni-henrici 162100 SAR_Eukaryotes SAR_Eukaryotes 283 4.1899999999999994e-72   NTclustered gi|33520207|gb|AY273952.1| 162100 g14214 i0 99.359 100.00641025641 156 1 100 0 1 156 54 209 Peronospora boni-henrici large subunit ribosomal RNA gene, partial sequence blastn 15601 283 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora boni-henrici
10681096 10681096 PRJNA495917_S_NODE_13409_length_159_cov_17.145161_g13215_i0 PRJNA495917 13409 159 17.145161 27.26080599 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 289 9.22e-74   NTclustered gi|238617605|gb|FJ973380.1| 45107 g13215 i0 99.371 100.786163522013 159 1 100 0 1 159 1187 1029 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 16025 289 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
11311056 11311056 PRJNA495917_S_NODE_2689_length_298_cov_1.939163_g2495_i0 PRJNA495917 2689 298 1.939163 5.77870574 Chlorellidium 240565 SAR_Eukaryotes SAR_Eukaryotes 442 1.4099999999999993e-119   NTclustered gi|46020003|emb|AJ580949.1| 243652 g2495 i0 93.624 99.9530201342282 298 16 100 2 1 298 357 63 Chlorellidium tetrabotrys partial 18S rRNA gene, strain SAG 5.90 blastn 29786 442 1 Eukaryota Sar     Xanthophyceae Mischococcales Botryochloridaceae Chlorellidium Chlorellidium tetrabotrys
12586782 12586782 PRJNA495917_S_NODE_11090_length_169_cov_2.373134_g10896_i0 PRJNA495917 11090 169 2.373134 4.01059646 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 235 1.31e-57   NTclustered gi|2307923332|ref|NC_066457.1| 3016 g10896 i0 91.765 169.597633136095 170 12 99 2 1 168 119162 119331 Sargassum fulvellum chloroplast, complete genome blastn 28662 235 1 Eukaryota Sar     Phaeophyceae Fucales Sargassaceae Sargassum Sargassum fulvellum
13231309 13231309 PRJNA495917_S_NODE_1331_length_409_cov_6.000000_g1137_i0 PRJNA495917 1331 409 6 24.54 Heterococcus caespitosus 55585 SAR_Eukaryotes SAR_Eukaryotes 630 3.9699999999999986e-176   NTclustered gi|157411020|gb|EF990191.1| 55585 g1137 i0 94.621 101.408312958435 409 19 100 3 1 409 1858 1453 Heterococcus caespitosus large subunit ribosomal RNA gene, partial sequence blastn 41476 630 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae Heterococcus Heterococcus caespitosus
13231457 13231457 PRJNA495917_S_NODE_9351_length_178_cov_10.083916_g9157_i0 PRJNA495917 9351 178 10.083916 17.94937048 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 327 2.23e-85   NTclustered gi|68271541|gb|DQ086722.1| 45107 g9157 i0 100 100.544943820225 177 0 99 0 1 177 343 519 Heteromita globosa isolate HETEGLOB large subunit ribosomal RNA gene, partial sequence blastn 17897 327 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
17054848 17054848 PRJNA495917_S_NODE_2034_length_341_cov_18.209150_g1840_i0 PRJNA495917 2034 341 18.20915 62.0932015 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 569 7.199999999999998e-158   NTclustered gi|238617605|gb|FJ973380.1| 45107 g1840 i0 96.774 99.2492668621701 341 11 100 0 1 341 1637 1297 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 33844 569 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
17054852 17054852 PRJNA495917_S_NODE_2694_length_297_cov_3.912214_g2500_i0 PRJNA495917 2694 297 3.912214 11.61927558 uncultured Heterococcus (in: yellow-green algae) 3049177 SAR_Eukaryotes SAR_Eukaryotes 532 8.08e-147   NTclustered gi|2515376786|gb|OR101643.1| 3049177 g2500 i0 98.99 100.680134680135 297 3 100 0 1 297 1407 1111 Uncultured Heterococcus (in: yellow-green algae) clone xcl32_AM0914 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29902 532 1 Eukaryota Sar     Xanthophyceae Tribonematales Heteropediaceae   uncultured Heterococcus (in: yellow-green algae)
19603448 19603448 PRJNA495917_S_NODE_2976_length_284_cov_3.767068_g2782_i0 PRJNA495917 2976 284 3.767068 10.69847312 Vaucheria litorea 109269 SAR_Eukaryotes SAR_Eukaryotes 429 1.04e-115   NTclustered gi|215400692|ref|NC_011600.1| 109269 g2782 i0 94.014 202.654929577465 284 16 100 1 1 284 64398 64680 Vaucheria litorea chloroplast, complete genome blastn 57554 429 1 Eukaryota Sar     Xanthophyceae Vaucheriales Vaucheriaceae Vaucheria Vaucheria litorea
20879316 20879316 PRJNA495917_S_NODE_14817_length_155_cov_1.983333_g14623_i0 PRJNA495917 14817 155 1.983333 3.07416615 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 193 7.2e-45   NTclustered gi|325195820|emb|FR826611.1| 890382 g14623 i0 92.029 25.7548387096774 138 10 89 1 2 139 74 210 Albugo laibachii Nc14, genomic contig CONTIG_3778_NC14_v4_313_8 blastn 3992 193 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
24059769 24059769 PRJNA495917_S_NODE_1459_length_393_cov_12.136872_g1265_i0 PRJNA495917 1459 393 12.136872 47.69790696 Heteromita 45106 SAR_Eukaryotes SAR_Eukaryotes 710 0   NTclustered gi|46393899|gb|AY496043.1| 45107 g1265 i0 99.237 100.045801526718 393 3 100 0 1 393 813 421 Heteromita globosa strain SCCAP H251 small subunit ribosomal RNA gene, partial sequence blastn 39318 715 0.993006993006993 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;