contig_metadata
16 rows where bioproject = "PRJNA495917", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3028473 | 3028473 | PRJNA495917_S_NODE_4083_length_245_cov_2.828571_g3889_i0 | PRJNA495917 | 4083 | 245 | 2.828571 | 6.92999895 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 307 | 4.2700000000000006e-79 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g3889 | i0 | 90 | 98.4040816326531 | 240 | 20 | 97 | 4 | 6 | 242 | 961 | 1199 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 24109 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 6855141 | 6855141 | PRJNA495917_S_NODE_2546_length_306_cov_133.029520_g2352_i0 | PRJNA495917 | 2546 | 306 | 133.02952 | 407.0703312 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 462 | 1.11e-125 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g2352 | i0 | 94.631 | 265.513071895425 | 298 | 16 | 97 | 0 | 1 | 298 | 1009079 | 1008782 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 81247 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 10681166 | 10681166 | PRJNA495917_S_NODE_3069_length_280_cov_2.685714_g2875_i0 | PRJNA495917 | 3069 | 280 | 2.685714 | 7.5199992 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 241 | 5.130000000000001e-59 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g2875 | i0 | 82.784 | 150.735714285714 | 273 | 44 | 97 | 3 | 1 | 272 | 1317348 | 1317078 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 42206 | 241 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13231381 | 13231381 | PRJNA495917_S_NODE_4111_length_244_cov_3.684211_g3917_i0 | PRJNA495917 | 4111 | 244 | 3.684211 | 8.98947484 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 399 | 6.819999999999998e-107 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g3917 | i0 | 96.311 | 364.401639344262 | 244 | 7 | 100 | 2 | 1 | 244 | 3411668 | 3411427 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 88914 | 399 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 13861499 | 13861499 | PRJNA495917_S_NODE_13751_length_158_cov_3.747967_g13557_i0 | PRJNA495917 | 13751 | 158 | 3.747967 | 5.92178786 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 231 | 1.5599999999999998e-56 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g13557 | i0 | 93.038 | 71.4240506329114 | 158 | 11 | 100 | 0 | 1 | 158 | 3411389 | 3411232 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 11285 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 14506305 | 14506305 | PRJNA495917_S_NODE_9052_length_180_cov_2.813793_g8858_i0 | PRJNA495917 | 9052 | 180 | 2.813793 | 5.0648274 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 243 | 8.439999999999999e-60 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g8858 | i0 | 92.398 | 16.8055555555556 | 171 | 12 | 95 | 1 | 10 | 180 | 1010378 | 1010209 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 3025 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 15780144 | 15780144 | PRJNA495917_S_NODE_2893_length_288_cov_5.241107_g2699_i0 | PRJNA495917 | 2893 | 288 | 5.241107 | 15.09438816 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 220 | 6.8999999999999985e-53 | NTclustered | gi|2916415364|gb|CP170459.1| | 2026799 | g2699 | i0 | 89.266 | 18.4097222222222 | 177 | 18 | 61 | 1 | 78 | 254 | 2577506 | 2577331 | MAG: Verrucomicrobiota bacterium isolate tig00002468 chromosome, complete genome | blastn | 5302 | 220 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 17054945 | 17054945 | PRJNA495917_S_NODE_954_length_484_cov_5.118040_g764_i0 | PRJNA495917 | 954 | 484 | 5.11804 | 24.7713136 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 372 | 3.19e-98 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g764 | i0 | 82.759 | 196.431818181818 | 435 | 58 | 87 | 15 | 1 | 423 | 3990449 | 3990020 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 95073 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 18329036 | 18329036 | PRJNA495917_S_NODE_10435_length_172_cov_3.656934_g10241_i0 | PRJNA495917 | 10435 | 172 | 3.656934 | 6.28992648 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 265 | 1.7e-66 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g10241 | i0 | 94.706 | 226.866279069767 | 170 | 9 | 99 | 0 | 3 | 172 | 1522 | 1353 | Luteolibacter sp. SL250 chromosome | blastn | 39021 | 265 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 18329180 | 18329180 | PRJNA495917_S_NODE_6595_length_201_cov_4.433735_g6401_i0 | PRJNA495917 | 6595 | 201 | 4.433735 | 8.91180735 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 294 | 2.63e-75 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g6401 | i0 | 93.035 | 93.8407960199005 | 201 | 14 | 100 | 0 | 1 | 201 | 1010042 | 1010242 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 18862 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 20234329 | 20234329 | PRJNA495917_S_NODE_3956_length_248_cov_302.023474_g3762_i0 | PRJNA495917 | 3956 | 248 | 302.023474 | 749.01821552 | Fontisphaera | 3050007 | Bacteria | Bacteria | 342 | 1.1899999999999999e-89 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g3762 | i0 | 91.633 | 115.201612903226 | 251 | 15 | 100 | 5 | 1 | 248 | 1316814 | 1317061 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 28570 | 342 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23429857 | 23429857 | PRJNA495917_S_NODE_13279_length_160_cov_1.560000_g13085_i0 | PRJNA495917 | 13279 | 160 | 1.56 | 2.496 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 63.9 | 6.13e-6 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g13085 | i0 | 95.122 | 0.25625 | 41 | 1 | 25 | 1 | 41 | 80 | 915874 | 915834 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 41 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 27929842 | 27929842 | PRJNA495917_S_NODE_5345_length_219_cov_1.956522_g5151_i0 | PRJNA495917 | 5345 | 219 | 1.956522 | 4.28478318 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 42.4 | 0.0382 | NR | MBE2181581.1 | 2201154 | g5151 | i0 | 33.9 | 0.849315068493151 | 62 | 38 | 80.8 | 1 | 188 | 12 | 990 | 1051 | MBE2181581.1 SDR family NAD(P)-dependent oxidoreductase [Chthoniobacterales bacterium] | diamond | 186 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 30171705 | 30171705 | PRJNA495917_S_NODE_13592_length_159_cov_1.290323_g13398_i0 | PRJNA495917 | 13592 | 159 | 1.290323 | 2.05161357 | Coraliomargarita sp. SDUM461 | 2024828 | Bacteria | Bacteria | 57 | 1.6e-8 | NR | WP_308984314.1 | 3041258 | g13398 | i0 | 54.2 | 1.45283018867925 | 48 | 21 | 88.7 | 1 | 18 | 158 | 7 | 54 | WP_308984314.1 DUF4326 domain-containing protein [Coraliomargarita sp. SDUM461004] | diamond | 231 | 57 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Thalassobacterium | Thalassobacterium sedimentorum | |
| 31941763 | 31941763 | PRJNA495917_S_NODE_6797_length_199_cov_3.036585_g6603_i0 | PRJNA495917 | 6797 | 199 | 3.036585 | 6.04280415 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 42.7 | 0.021 | NR | MFT5470505.1 | 2026801 | g6603 | i0 | 36.4 | 0.994974874371859 | 66 | 41 | 98 | 1 | 2 | 196 | 103 | 168 | MFT5470505.1 MFS family permease [Verrucomicrobiales bacterium] | diamond | 198 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32495527 | 32495527 | PRJNA495917_S_NODE_16779_length_150_cov_1.391304_g16585_i0 | PRJNA495917 | 16779 | 150 | 1.391304 | 2.086956 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 53.9 | 1.15e-6 | NR | HXU58913.1 | 2499141 | g16585 | i0 | 51.2 | 4.1 | 41 | 20 | 82 | 0 | 145 | 23 | 61 | 101 | HXU58913.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 615 | 53.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;