RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA495917", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA495917 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28245347 28245347 PRJNA495917_S_NODE_11166_length_169_cov_1.194030_g10972_i0 PRJNA495917 11166 169 1.19403 2.0179107 Chlorobiaceae bacterium 2067991 Bacteria Bacteria 42.4 0.0192   NR NTV01924.1 2067991 g10972 i0 64.5 1.61538461538462 31 11 55 0 165 73 451 481 NTV01924.1 phage terminase large subunit [Chlorobiaceae bacterium] diamond 273 42.4 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium
30582310 30582310 PRJNA495917_S_NODE_16793_length_150_cov_1.391304_g16599_i0 PRJNA495917 16793 150 1.391304 2.086956 Chlorobiaceae bacterium 2067991 Bacteria Bacteria 69.3 4.09e-12   NR MEI7824969.1 2067991 g16599 i0 75.5 1.96 49 12 98 0 2 148 265 313 MEI7824969.1 glycosyltransferase family 4 protein [Chlorobiaceae bacterium] diamond 294 69.3 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;