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contig_metadata

7 rows where bioproject = "PRJNA495391" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

bioproject 1

  • PRJNA495391 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11954869 11954869 PRJNA495391_S_NODE_28090_length_228_cov_1.559585_g27038_i0 PRJNA495391 28090 228 1.559585 3.5558538 Haloarcula regularis 3033392 Archaea Archaea 52.8 0.02   NTclustered gi|2463595545|gb|CP119794.1| 3033392 g27038 i0 100 0.12280701754386 28 0 12 0 170 197 704128 704155 Haloarcula regularis strain SYNS111 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
27298271 27298271 PRJNA495391_S_NODE_43503_length_186_cov_2.231788_g42451_i0 PRJNA495391 43503 186 2.231788 4.15112568 archaeon 1906665 Archaea Archaea 84.7 1.02e-19   NR RYG99347.1 1906665 g42451 i0 69 0.935483870967742 58 18 93.5 0 186 13 30 87 RYG99347.1 MAG: hypothetical protein EON65_50365 [archaeon] diamond 174 84.7 1 Archaea               archaeon
28213699 28213699 PRJNA495391_S_NODE_23726_length_247_cov_1.957547_g22674_i0 PRJNA495391 23726 247 1.957547 4.83514109 archaeon 1906665 Archaea Archaea 120 1.8799999999999999e-31   NR MDP2435337.1 1906665 g22674 i0 71.6 3.97165991902834 81 23 98.4 0 2 244 175 255 MDP2435337.1 30S ribosomal protein S5 [archaeon] diamond 981 120 1 Archaea               archaeon
29192923 29192923 PRJNA495391_S_NODE_39749_length_194_cov_2.389937_g38697_i0 PRJNA495391 39749 194 2.389937 4.63647778 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 63.5 3.92e-11   NR MCK9567338.1 2026773 g38697 i0 59.3 2.50515463917526 54 22 83.5 0 167 6 1 54 MCK9567338.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 486 63.5 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29382224 29382224 PRJNA495391_S_NODE_10129_length_379_cov_2.162791_g9077_i0 PRJNA495391 10129 379 2.162791 8.19697789 Thermoplasmata archaeon 1906666 Archaea Archaea 45.8 0.0113   NR MBS72445.1 1906666 g9077 i0 28.7 0.910290237467018 115 71 85.5 3 377 54 145 255 MBS72445.1 hypothetical protein [Thermoplasmata archaeon] diamond 345 45.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31530908 31530908 PRJNA495391_S_NODE_15336_length_305_cov_3.051852_g14284_i0 PRJNA495391 15336 305 3.051852 9.3081486 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 67 1.33e-11   NR MBN2421169.1 2026803 g14284 i0 42.9 0.757377049180328 77 44 75.7 0 9 239 41 117 MBN2421169.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 231 67 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31530915 31530915 PRJNA495391_S_NODE_33456_length_210_cov_2.731429_g32404_i0 PRJNA495391 33456 210 2.731429 5.7360009 Candidatus Methanoplasma porotermitis 3136100 Archaea Archaea 72.8 5.37e-13   NR MDR3282304.1 3136100 g32404 i0 49.2 2.61428571428571 61 31 87.1 0 2 184 283 343 MDR3282304.1 hypothetical protein [Candidatus Methanoplasma porotermitis] diamond 549 72.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanoplasma Candidatus Methanoplasma porotermitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;