RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA495391" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA495391 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26665213 26665213 PRJNA495391_S_NODE_22121_length_255_cov_2.422727_g21069_i0 PRJNA495391 22121 255 2.422727 6.17795385 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 101 1.11e-22   NR GIV03843.1 2682145 g21069 i0 58.8 0.941176470588235 80 33 94.1 0 244 5 380 459 GIV03843.1 MAG: hypothetical protein KatS3mg015_2673 [Fimbriimonadales bacterium] diamond 240 101 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29192933 29192933 PRJNA495391_S_NODE_6269_length_491_cov_3.168860_g5231_i0 PRJNA495391 6269 491 3.16886 15.5591026 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 187 1.19e-51   NR GIV03843.1 2682145 g5231 i0 58.4 1.96741344195519 161 66 98.4 1 486 4 157 316 GIV03843.1 MAG: hypothetical protein KatS3mg015_2673 [Fimbriimonadales bacterium] diamond 966 187 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;