RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA495391", tax_kingdom = "Pararnavirae" and tax_phylum = "Artverviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Artverviricota · 2 ✖

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA495391 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16409915 16409915 PRJNA495391_S_NODE_30053_length_221_cov_1.833333_g29001_i0 PRJNA495391 30053 221 1.833333 4.05166593 root 1 Root_unresolved Root_unresolved 398 2.1799999999999995e-106   NTclustered gi|332029|gb|J02254.1|MLVENVPRM 11786 g29001 i0 99.095 93.814479638009 221 2 100 0 1 221 286 66 Moloney mink cell focus-forming proviral env gene and LTR blastn 20733 398 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31340938 31340938 PRJNA495391_S_NODE_19076_length_274_cov_3.276151_g18024_i0 PRJNA495391 19076 274 3.276151 8.97665374 Spiretrovirus homo8524 3117321 Viruses Viruses 88.6 4.14e-18   NR DBA49540.1 3117321 g18024 i0 46.8 6.05474452554745 79 42 86.5 0 36 272 903 981 DBA49540.1 MAG TPA_asm: Gag-Pol [Spiretrovirus homo8524] diamond 1659 88.6 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales     Spiretrovirus homo8524

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;