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contig_metadata

3 rows where bioproject = "PRJNA495391" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA495391 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11954869 11954869 PRJNA495391_S_NODE_28090_length_228_cov_1.559585_g27038_i0 PRJNA495391 28090 228 1.559585 3.5558538 Haloarcula regularis 3033392 Archaea Archaea 52.8 0.02   NTclustered gi|2463595545|gb|CP119794.1| 3033392 g27038 i0 100 0.12280701754386 28 0 12 0 170 197 704128 704155 Haloarcula regularis strain SYNS111 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
29382224 29382224 PRJNA495391_S_NODE_10129_length_379_cov_2.162791_g9077_i0 PRJNA495391 10129 379 2.162791 8.19697789 Thermoplasmata archaeon 1906666 Archaea Archaea 45.8 0.0113   NR MBS72445.1 1906666 g9077 i0 28.7 0.910290237467018 115 71 85.5 3 377 54 145 255 MBS72445.1 hypothetical protein [Thermoplasmata archaeon] diamond 345 45.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31530915 31530915 PRJNA495391_S_NODE_33456_length_210_cov_2.731429_g32404_i0 PRJNA495391 33456 210 2.731429 5.7360009 Candidatus Methanoplasma porotermitis 3136100 Archaea Archaea 72.8 5.37e-13   NR MDR3282304.1 3136100 g32404 i0 49.2 2.61428571428571 61 31 87.1 0 2 184 283 343 MDR3282304.1 hypothetical protein [Candidatus Methanoplasma porotermitis] diamond 549 72.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanoplasma Candidatus Methanoplasma porotermitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;