RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA495391", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA495391 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23428261 23428261 PRJNA495391_S_NODE_17739_length_284_cov_3.188755_g16687_i0 PRJNA495391 17739 284 3.188755 9.0560642 Philodina citrina 468664 Rotifera other_Eukaryota 364 2.969999999999999e-96   NTclustered gi|407227484|emb|FR856884.1| 468664 g16687 i0 89.825 3.56338028169014 285 27 100 2 1 284 2279 1996 Philodina citrina complete mitochondrial genome blastn 1012 364 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
32305854 32305854 PRJNA495391_S_NODE_65119_length_156_cov_1.140496_g64067_i0 PRJNA495391 65119 156 1.140496 1.77917376 Rotaria 231623 Rotifera other_Eukaryota 39.7 0.0453   NR CAF1960065.1 392030 g64067 i0 69.6 0.884615384615385 23 7 44.2 0 102 34 67 89 CAF1960065.1 unnamed protein product [Rotaria magnacalcarata] diamond 138 39.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
32606198 32606198 PRJNA495391_S_NODE_61300_length_160_cov_1.264000_g60248_i0 PRJNA495391 61300 160 1.264 2.0224 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 86.7 9.09e-19   NR CAF4246331.1 2762512 g60248 i0 78.4 0.95625 51 11 95.6 0 158 6 224 274 CAF4246331.1 unnamed protein product, partial [Rotaria sp. Silwood2] diamond 153 86.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;