RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA495391", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 13 ✖

tax_kingdom 1

  • Fungi · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA495391 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8760104 8760104 PRJNA495391_S_NODE_21407_length_259_cov_2.821429_g20355_i0 PRJNA495391 21407 259 2.821429 7.30750111 Opisthokonta 33154 Fungi Fungi 479 9.13e-131   NTclustered gi|19386988|gb|AF450112.1| 109953 g20355 i0 100 99.5598455598456 259 0 100 0 1 259 799 541 Monoblepharis insignis translation elongation factor 1-alpha gene, partial cds blastn 25786 479 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Monoblepharidaceae Monoblepharis Monoblepharis insignis
9404631 9404631 PRJNA495391_S_NODE_47828_length_178_cov_2.307692_g46776_i0 PRJNA495391 47828 178 2.307692 4.10769176 Polychytrium aggregatum 110093 Fungi Fungi 121 4.0699999999999996e-23   NTclustered gi|2432135199|ref|XM_053109835.1| 110093 g46776 i0 80.625 2.37640449438202 160 27 89 4 19 176 1611 1454 Polychytrium aggregatum formate--tetrahydrofolate ligase-domain-containing protein (BJ171DRAFT_492736), mRNA blastn 423 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
26823955 26823955 PRJNA495391_S_NODE_13621_length_324_cov_2.093426_g12569_i0 PRJNA495391 13621 324 2.093426 6.78270024 Quaeritorhiza haematococci 2654861 Fungi Fungi 99.8 5.92e-22   NR KAJ3089423.1 2654861 g12569 i0 48 1.87962962962963 102 53 94.4 0 1 306 349 450 KAJ3089423.1 hypothetical protein HK102_006440 [Quaeritorhiza haematococci] diamond 609 99.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
27187183 27187183 PRJNA495391_S_NODE_62762_length_158_cov_1.967480_g61710_i0 PRJNA495391 62762 158 1.96748 3.1086184 Fungi 4751 Fungi Fungi 44.3 0.00335   NR KAI9010677.1 82268 g61710 i0 42.9 6.11392405063291 49 27 91.1 1 151 8 266 314 KAI9010677.1 hypothetical protein DFJ74DRAFT_685329 [Hyaloraphidium curvatum] diamond 966 44.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
27282261 27282261 PRJNA495391_S_NODE_51863_length_172_cov_1.474453_g50811_i0 PRJNA495391 51863 172 1.474453 2.53605916 Chytridiales 4810 Fungi Fungi 47 4.46e-4   NR KAJ3387508.1 4814 g50811 i0 39.6 3.62790697674419 53 32 92.4 0 6 164 346 398 KAJ3387508.1 hypothetical protein HDU80_000152, partial [Chytriomyces hyalinus] diamond 624 47 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
28403437 28403437 PRJNA495391_S_NODE_42326_length_189_cov_1.253247_g41274_i0 PRJNA495391 42326 189 1.253247 2.36863683 Chytridiales sp. JEL 2011832 Fungi Fungi 113 2.9700000000000004e-27   NR KAJ3411953.1 2786947 g41274 i0 77.8 2 63 14 100 0 189 1 961 1023 KAJ3411953.1 Myo-inositol-1-phosphate synthase, partial [Chytridiales sp. JEL 0842] diamond 378 113 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     Chytridiales sp. JEL 0842
29129864 29129864 PRJNA495391_S_NODE_65549_length_155_cov_1.991667_g64497_i0 PRJNA495391 65549 155 1.991667 3.08708385 Rhizophlyctis rosea 64517 Fungi Fungi 68.9 1.13e-12   NR KAJ3035639.1 64517 g64497 i0 88.6 8.12903225806452 35 4 67.7 0 154 50 141 175 KAJ3035639.1 40S ribosomal protein S26 [Rhizophlyctis rosea] diamond 1260 68.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
30218826 30218826 PRJNA495391_S_NODE_47312_length_179_cov_2.152778_g46260_i0 PRJNA495391 47312 179 2.152778 3.85347262 Chytridiomycetes 451435 Fungi Fungi 55.5 1.91e-7   NR XP_052967560.1 110093 g46260 i0 57.1 2.88268156424581 56 20 87.2 1 175 20 117 172 XP_052967560.1 ubiquitin-conjugating enzyme/RWD-like protein [Polychytrium aggregatum] diamond 516 55.8 0.99462365591397806 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
31040657 31040657 PRJNA495391_S_NODE_62955_length_158_cov_1.609756_g61903_i0 PRJNA495391 62955 158 1.609756 2.54341448 Fungi 4751 Fungi Fungi 53.9 1.32e-6   NR TPX46431.1 286115 g61903 i0 53.8 3.91139240506329 52 23 96.8 1 4 156 134 185 TPX46431.1 hypothetical protein SeLEV6574_g03237 [Synchytrium endobioticum] diamond 618 53.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
31182483 31182483 PRJNA495391_S_NODE_19955_length_269_cov_1.820513_g18903_i0 PRJNA495391 19955 269 1.820513 4.89717997 Rhizoclosmatium globosum 329046 Fungi Fungi 60.8 2.18e-8   NR ORY52977.1 329046 g18903 i0 45.2 1.41635687732342 62 34 69.1 0 204 19 312 373 ORY52977.1 hypothetical protein BCR33DRAFT_761302 [Rhizoclosmatium globosum] diamond 381 60.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Rhizoclosmatium Rhizoclosmatium globosum
31862358 31862358 PRJNA495391_S_NODE_29197_length_224_cov_1.571429_g28145_i0 PRJNA495391 29197 224 1.571429 3.52000096 Chytridiomycetes 451435 Fungi Fungi 119 3.29e-30   NR XP_016606359.1 645134 g28145 i0 77.8 5.8125 72 16 96.4 0 1 216 315 386 XP_016606359.1 UMP-CMP kinase [Spizellomyces punctatus DAOM BR117] diamond 1302 120 0.991666666666667 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
32068366 32068366 PRJNA495391_S_NODE_13778_length_322_cov_2.153310_g12726_i0 PRJNA495391 13778 322 2.15331 6.9336582 Gaertneriomyces semiglobifer 109897 Fungi Fungi 110 1.53e-26   NR KAI9007260.1 109897 g12726 i0 48.1 0.987577639751553 106 55 98.8 0 322 5 216 321 KAI9007260.1 mitochondrial carrier [Gaertneriomyces semiglobifer] diamond 318 110 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Gaertneriomyces Gaertneriomyces semiglobifer
32305843 32305843 PRJNA495391_S_NODE_14079_length_319_cov_1.834507_g13027_i0 PRJNA495391 14079 319 1.834507 5.85207733 Synchytriales 2231171 Fungi Fungi 118 2.5199999999999997e-30   NR TPX36054.1 286115 g13027 i0 61.3 3.91222570532915 106 40 99.7 1 319 2 136 240 TPX36054.1 hypothetical protein SeMB42_g07120 [Synchytrium endobioticum] diamond 1248 118 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;