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contig_metadata

8 rows where bioproject = "PRJNA495391", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA495391 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1752281 1752281 PRJNA495391_S_NODE_9362_length_394_cov_3.816156_g8310_i0 PRJNA495391 9362 394 3.816156 15.03565464 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 359 1.9799999999999998e-94   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8310 i0 87.662 44.6446700507614 308 38 100 0 1 308 301640 301947 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 17590 359 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4303525 4303525 PRJNA495391_S_NODE_46904_length_180_cov_1.744828_g45852_i0 PRJNA495391 46904 180 1.744828 3.1406904 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 209 8.56e-50   NTclustered gi|820695469|tpe|LN714488.1| 572307 g45852 i0 89.759 1.84444444444444 166 14 92 3 1 165 80407 80570 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 332 209 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
11310127 11310127 PRJNA495391_S_NODE_10369_length_374_cov_2.185841_g9317_i0 PRJNA495391 10369 374 2.185841 8.17504534 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 603 7.829999999999997e-168   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g9317 i0 95.722 1037.79144385027 374 16 100 0 1 374 403 30 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 388134 608 0.991776315789474 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
11955679 11955679 PRJNA495391_S_NODE_58450_length_163_cov_1.546875_g57398_i0 PRJNA495391 58450 163 1.546875 2.52140625 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 241 2.7000000000000008e-59   NTclustered gi|820695469|tpe|LN714488.1| 572307 g57398 i0 93.75 7.34355828220859 160 10 100 0 1 160 300561 300402 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1197 241 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18327416 18327416 PRJNA495391_S_NODE_13495_length_325_cov_3.148276_g12443_i0 PRJNA495391 13495 325 3.148276 10.231897 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 560 4.1e-155   NTclustered gi|820695469|tpe|LN714488.1| 572307 g12443 i0 97.84 5.22153846153846 324 7 99 0 1 324 117536 117213 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1697 560 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
22153244 22153244 PRJNA495391_S_NODE_47818_length_178_cov_2.384615_g46766_i0 PRJNA495391 47818 178 2.384615 4.2446147 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 222 1.08e-53   NTclustered gi|820695469|tpe|LN714488.1| 572307 g46766 i0 95.652 22.1404494382022 138 6 100 0 1 138 299862 299999 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 3941 222 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
28656081 28656081 PRJNA495391_S_NODE_17007_length_290_cov_3.686275_g15955_i0 PRJNA495391 17007 290 3.686275 10.6901975 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 75.1 4.43e-14   NR XP_011132135.1 110365 g15955 i0 49.4 0.879310344827586 85 42 87.9 1 20 274 102 185 XP_011132135.1 hypothetical protein GNI_130140 [Gregarina niphandrodes] diamond 255 75.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
32068389 32068389 PRJNA495391_S_NODE_42458_length_188_cov_2.581699_g41406_i0 PRJNA495391 42458 188 2.581699 4.85359412 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 67.4 1.03e-11   NR XP_011132135.1 110365 g41406 i0 50.9 0.909574468085106 57 28 91 0 181 11 45 101 XP_011132135.1 hypothetical protein GNI_130140 [Gregarina niphandrodes] diamond 171 67.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;