RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA495391", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA495391 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20877652 20877652 PRJNA495391_S_NODE_17777_length_284_cov_2.216867_g16725_i0 PRJNA495391 17777 284 2.216867 6.29590228 Suberites domuncula 55567 Porifera other_Eukaryota 125 9.7e-33   NR Q4KTI3.1 55567 g16725 i0 62.1 1.98591549295775 95 34 98.2 1 284 6 137 231 Q4KTI3.1 RecName: Full=Large ribosomal subunit protein uL18; AltName: Full=60S ribosomal protein L5 [Suberites domuncula] diamond 564 125 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites domuncula
27976866 27976866 PRJNA495391_S_NODE_58745_length_163_cov_1.046875_g57693_i0 PRJNA495391 58745 163 1.046875 1.70640625 Metazoa 33208 Porifera other_Eukaryota 67.4 2.55e-11   NR XP_064404129.1 6063 g57693 i0 51.9 11.2822085889571 52 25 95.7 0 4 159 793 844 XP_064404129.1 uncharacterized protein LOC135349527 [Halichondria panicea] diamond 1839 67.8 0.994100294985251 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;