RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA495391", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Uhriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA495391 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31451503 31451503 PRJNA495391_S_NODE_30756_length_219_cov_1.152174_g29704_i0 PRJNA495391 30756 219 1.152174 2.52326106 Bacteria 2 Bacteria Bacteria 116 2.99e-28   NR PIQ67671.1 1975040 g29704 i0 74.6 2.94520547945205 71 18 97.3 0 214 2 452 522 PIQ67671.1 MAG: glutamine--fructose-6-phosphate transaminase (isomerizing) [Candidatus Uhrbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_41_9] diamond 645 116 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_41_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;