RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA494251" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5578664 5578664 PRJNA494251_P_NODE_11905_length_393_cov_1.912500_g11598_i0 PRJNA494251 11905 393 1.9125 7.516125 Synergistales bacterium 2268201 Bacteria Bacteria 87 6.73e-17   NR MBP8996187.1 2268201 g11598 i0 47.8 1.72519083969466 113 57 85.5 2 50 385 225 336 MBP8996187.1 VCBS domain-containing protein [Synergistales bacterium] diamond 678 87 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
26887326 26887326 PRJNA494251_P_NODE_9521_length_432_cov_2.406685_g9216_i0 PRJNA494251 9521 432 2.406685 10.3968792 Synergistales bacterium 2268201 Bacteria Bacteria 75.5 1.16e-12   NR MBP8996187.1 2268201 g9216 i0 41.6 1.56944444444444 113 60 77.8 3 428 93 241 348 MBP8996187.1 VCBS domain-containing protein [Synergistales bacterium] diamond 678 75.5 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
28845205 28845205 PRJNA494251_P_NODE_16768_length_341_cov_1.701493_g16455_i0 PRJNA494251 16768 341 1.701493 5.80209113 Synergistaceae bacterium 2053624 Bacteria Bacteria 79 2.5e-15   NR MBQ3627073.1 2053624 g16455 i0 49.3 1.30205278592375 75 37 65.1 1 339 118 44 118 MBQ3627073.1 ribonuclease P subunit p25 family protein [Synergistaceae bacterium] diamond 444 79 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31625481 31625481 PRJNA494251_P_NODE_15656_length_351_cov_1.636691_g15343_i0 PRJNA494251 15656 351 1.636691 5.74478541 Synergistaceae bacterium 2053624 Bacteria Bacteria 74.7 8.28e-13   NR MBQ3398288.1 2053624 g15343 i0 44.3 2.94871794871795 115 61 96.6 2 2 340 788 901 MBQ3398288.1 putative Ig domain-containing protein [Synergistaceae bacterium] diamond 1035 74.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;