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contig_metadata

7 rows where bioproject = "PRJNA494251" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4935092 4935092 PRJNA494251_P_NODE_33764_length_259_cov_3.306452_g33450_i0 PRJNA494251 33764 259 3.306452 8.56371068 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 433 7.21e-117   NTclustered gi|937513727|gb|CP012850.1| 1353260 g33450 i0 98.374 22.2162162162162 246 4 95 0 1 246 850439 850684 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 5754 433 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
10678869 10678869 PRJNA494251_P_NODE_24189_length_294_cov_3.447964_g23875_i0 PRJNA494251 24189 294 3.447964 10.13701416 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 520 6.219999999999998e-143   NTclustered gi|937513727|gb|CP012850.1| 1353260 g23875 i0 98.635 42.2551020408163 293 4 99 0 1 293 848740 849032 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 12423 520 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
27155315 27155315 PRJNA494251_P_NODE_44882_length_245_cov_0.895349_g44568_i0 PRJNA494251 44882 245 0.895349 2.19360505 Nitrosopumilus 338191 Archaea Archaea 42.7 0.0334   NR MSS85537.1 2024843 g44568 i0 71.4 1.04081632653061 28 7 33.1 1 215 135 214 241 MSS85537.1 hypothetical protein [Nitrosopumilus sp.] diamond 255 42.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
30234907 30234907 PRJNA494251_P_NODE_9712_length_429_cov_0.960674_g9407_i0 PRJNA494251 9712 429 0.960674 4.12129146 Nitrososphaerota archaeon 2026795 Archaea Archaea 44.7 0.0498   NR MDE1830640.1 2026795 g9407 i0 20.8 0.741258741258741 106 84 74.1 0 11 328 190 295 MDE1830640.1 hypothetical protein [Nitrososphaerota archaeon] diamond 318 44.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31213920 31213920 PRJNA494251_P_NODE_3495_length_664_cov_1.475465_g3216_i0 PRJNA494251 3495 664 1.475465 9.7970876 Candidatus Nitrosotenuis sp. 2507556 Archaea Archaea 120 3.66e-27   NR MEM2159665.1 2507556 g3216 i0 39.9 0.871987951807229 193 109 86.7 4 664 89 367 553 MEM2159665.1 hypothetical protein [Candidatus Nitrosotenuis sp.] diamond 579 120 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis sp.
31483223 31483223 PRJNA494251_P_NODE_29376_length_274_cov_1.532338_g29062_i0 PRJNA494251 29376 274 1.532338 4.19860612 Nitrosotalea 1078904 Archaea Archaea 69.7 1.76e-11   NR MDE1826414.1 2026795 g29062 i0 42.3 4.19343065693431 97 46 96.4 4 6 269 875 970 MDE1826414.1 fibronectin type III domain-containing protein [Nitrososphaerota archaeon] diamond 1149 69.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32416622 32416622 PRJNA494251_P_NODE_47799_length_242_cov_1.479290_g47485_i0 PRJNA494251 47799 242 1.47929 3.5798818 Candidatus Nitrosocaldaceae archaeon 2838776 Archaea Archaea 64.3 3.07e-11   NR MEM2856149.1 2838776 g47485 i0 66.7 0.991735537190083 39 13 48.3 0 241 125 54 92 MEM2856149.1 4a-hydroxytetrahydrobiopterin dehydratase [Candidatus Nitrosocaldaceae archaeon] diamond 240 64.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Candidatus Nitrosocaldales Candidatus Nitrosocaldaceae   Candidatus Nitrosocaldaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;