RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA494251", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22784060 22784060 PRJNA494251_S_NODE_858_length_199_cov_4.047619_g843_i0 PRJNA494251 858 199 4.047619 8.05476181 Orthoflavivirus 3044782 Viruses Viruses 339 1.18e-88   NTclustered gi|1862833469|emb|LR743454.1| 11082 g843 i0 100 91.9597989949749 183 0 92 0 3 185 10943 10761 West Nile virus isolate ED-I-205_19 genome assembly, complete genome: monopartite blastn 18300 339 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus nilense
30424915 30424915 PRJNA494251_P_NODE_27193_length_282_cov_1.473684_g26879_i0 PRJNA494251 27193 282 1.473684 4.15578888 Hepelivirales sp. 2809460 Viruses Viruses 72 3.08e-12   NR WAY16437.1 2809460 g26879 i0 46.4 0.893617021276596 84 44 88.3 1 2 250 2019 2102 WAY16437.1 nonstructural polyprotein [Hepelivirales sp.] diamond 252 72 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;