RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA494251" and tax_phylum = "Gastrotricha"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA494251 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475331 475331 PRJNA494251_P_NODE_23941_length_296_cov_1.273543_g23627_i0 PRJNA494251 23941 296 1.273543 3.76968728 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 279 1.16e-70   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g23627 i0 84.507 1.39864864864865 284 42 96 2 7 289 9895 9613 Lepidodermella squamata mitochondrion, complete genome blastn 414 279 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
13228946 13228946 PRJNA494251_P_NODE_1211_length_1054_cov_56.124363_g1025_i0 PRJNA494251 1211 1054 56.124363 591.55078602 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 1626 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g1025 i0 94.523 12.0635673624288 1059 48 99 7 1 1053 9455 8401 Lepidodermella squamata mitochondrion, complete genome blastn 12715 1626 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
15778214 15778214 PRJNA494251_P_NODE_6473_length_510_cov_2.517162_g6172_i0 PRJNA494251 6473 510 2.517162 12.8375262 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 388 3.35e-103   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g6172 i0 80.8 28.5529411764706 500 92 98 4 4 501 13795 14292 Lepidodermella squamata mitochondrion, complete genome blastn 14562 388 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
20877289 20877289 PRJNA494251_P_NODE_4577_length_593_cov_1.450000_g4284_i0 PRJNA494251 4577 593 1.45 8.5985 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 599 1.6699999999999995e-166   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g4284 i0 85.059 65.9629005059022 589 86 99 2 1 588 13761 13174 Lepidodermella squamata mitochondrion, complete genome blastn 39116 599 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
22151746 22151746 PRJNA494251_P_NODE_17898_length_332_cov_1.621622_g17584_i0 PRJNA494251 17898 332 1.621622 5.38378504 Heterolepidoderma striatum 3024583 Gastrotricha other_Eukaryota 429 1.2399999999999996e-115   NTclustered gi|2437769833|gb|OQ354332.1| 3024583 g17584 i0 91.613 87.4096385542169 310 26 93 0 22 331 1 310 Heterolepidoderma striatum isolate DB 12 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 29020 429 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Heterolepidoderma Heterolepidoderma striatum
28498213 28498213 PRJNA494251_P_NODE_19087_length_323_cov_3.436000_g18773_i0 PRJNA494251 19087 323 3.436 11.09828 Litigonotus ghinii 3104745 Gastrotricha other_Eukaryota 134 1.07e-36   NR XCN99738.1 3104745 g18773 i0 69.8 0.984520123839009 106 32 98.5 0 321 4 17 122 XCN99738.1 ATP synthase F0 subunit 6 [Litigonotus ghinii] diamond 318 134 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Litigonotus Litigonotus ghinii
29413647 29413647 PRJNA494251_P_NODE_35949_length_253_cov_1.711111_g35635_i0 PRJNA494251 35949 253 1.711111 4.32911083 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 118 2.3499999999999998e-32   NR YP_009136578.1 1194616 g35635 i0 88.1 0.794466403162055 67 8 79.4 0 222 22 8 74 YP_009136578.1 NADH dehydrogenase subunit 3 [Lepidodermella squamata] diamond 201 118 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;