RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA494251", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29066559 29066559 PRJNA494251_P_NODE_3088_length_701_cov_1.716561_g2817_i0 PRJNA494251 3088 701 1.716561 12.03309261 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 81.6 2.09e-14   NR MBD3210577.1 2250274 g2817 i0 40.2 0.457917261055635 107 59 44.9 4 361 47 87 190 MBD3210577.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 321 81.6 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
29887481 29887481 PRJNA494251_P_NODE_2111_length_823_cov_2.062667_g1869_i0 PRJNA494251 2111 823 2.062667 16.97574941 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 67.8 9.76e-9   NR MCX6776199.1 2250274 g1869 i0 84.8 1.02065613608748 33 5 12 0 199 297 25 57 MCX6776199.1 serpin family protein [Candidatus Micrarchaeota archaeon] diamond 840 67.8 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
31941684 31941684 PRJNA494251_P_NODE_28677_length_277_cov_0.995098_g28363_i0 PRJNA494251 28677 277 0.995098 2.75642146 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 113 2.79e-27   NR MBU0527194.1 2250274 g28363 i0 62.8 1.68953068592058 78 29 84.5 0 276 43 346 423 MBU0527194.1 ATPase [Candidatus Micrarchaeota archaeon] diamond 468 113 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;