RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA494251" and tax_phylum = "Candidatus Helarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Helarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29350683 29350683 PRJNA494251_P_NODE_39789_length_249_cov_0.875000_g39475_i0 PRJNA494251 39789 249 0.875 2.17875 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 78.6 6.94e-15   NR NVM05160.1 2719382 g39475 i0 55.4 3.34939759036145 65 29 78.3 0 195 1 2 66 NVM05160.1 molecular chaperone DnaJ [Candidatus Helarchaeota archaeon] diamond 834 78.6 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon
31182438 31182438 PRJNA494251_P_NODE_25415_length_289_cov_1.425926_g25101_i0 PRJNA494251 25415 289 1.425926 4.12092614 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 58.5 4.88e-8   NR NVM02687.1 2719382 g25101 i0 48.2 0.581314878892734 56 29 58.1 0 264 97 112 167 NVM02687.1 GTP-binding protein [Candidatus Helarchaeota archaeon] diamond 168 58.5 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;