RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA494251", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA494251 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29950594 29950594 PRJNA494251_P_NODE_34131_length_258_cov_2.421622_g33817_i0 PRJNA494251 34131 258 2.421622 6.24778476 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 42.4 0.0203   NR HID17884.1 2026714 g33817 i0 39.6 0.558139534883721 48 28 55.8 1 154 11 32 78 HID17884.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 144 42.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31277569 31277569 PRJNA494251_P_NODE_52315_length_209_cov_53.477941_g52001_i0 PRJNA494251 52315 209 53.477941 111.76889669 Candidatus Bathyarchaeota archaeon B26-1 1779370 Archaea Archaea 68.6 1.5e-13   NR KYH39817.1 1779370 g52001 i0 56.6 1.4066985645933 53 23 76.1 0 195 37 1 53 KYH39817.1 MAG: 30S ribosomal protein S14 [Candidatus Bathyarchaeota archaeon B26-1] diamond 294 68.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon B26-1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;