contig_metadata
8 rows where bioproject = "PRJNA494251", tax_phylum = "Artverviricota" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4935038 | 4935038 | PRJNA494251_P_NODE_19164_length_323_cov_1.232000_g18850_i0 | PRJNA494251 | 19164 | 323 | 1.232 | 3.97936 | root | 1 | Root_unresolved | Root_unresolved | 58.4 | 6.52e-4 | NTclustered | gi|94539197|gb|DQ484472.1| | 11676 | g18850 | i0 | 100 | 6.06811145510836 | 31 | 0 | 10 | 0 | 1 | 31 | 104 | 74 | HIV-1 isolate BCCFE_HOMER_HIV_NEF406 from Canada nef protein (nef) gene, partial cds | blastn | 1960 | 58.4 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Lentivirus | Lentivirus humimdef1 | ||
| 4935108 | 4935108 | PRJNA494251_P_NODE_3744_length_645_cov_92.047203_g3342_i1 | PRJNA494251 | 3744 | 645 | 92.047203 | 593.70445935 | Gammaretrovirus | 153135 | Viruses | Viruses | 1014 | 0 | NTclustered | gi|331934|gb|J02255.1|MLMCG | 11786 | g3342 | i1 | 97.797 | 87.0697674418605 | 590 | 10 | 91 | 2 | 56 | 642 | 4441 | 3852 | Moloney murine leukemia virus, complete genome | blastn | 56160 | 1014 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 6210319 | 6210319 | PRJNA494251_P_NODE_3625_length_653_cov_100.065517_g3342_i0 | PRJNA494251 | 3625 | 653 | 100.065517 | 653.42782601 | Gammaretrovirus | 153135 | Viruses | Viruses | 1037 | 0 | NTclustered | gi|331934|gb|J02255.1|MLMCG | 11786 | g3342 | i0 | 98.469 | 87.2848392036753 | 588 | 9 | 90 | 0 | 63 | 650 | 4439 | 3852 | Moloney murine leukemia virus, complete genome | blastn | 56997 | 1037 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 16409555 | 16409555 | PRJNA494251_P_NODE_2813_length_725_cov_9.556748_g2545_i0 | PRJNA494251 | 2813 | 725 | 9.556748 | 69.286423 | root | 1 | Root_unresolved | Root_unresolved | 438 | 4.769999999999999e-118 | NTclustered | gi|331934|gb|J02255.1|MLMCG | 11786 | g2545 | i0 | 82.341 | 6.6 | 504 | 89 | 70 | 0 | 155 | 658 | 2171 | 1668 | Moloney murine leukemia virus, complete genome | blastn | 4785 | 438 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 16409636 | 16409636 | PRJNA494251_P_NODE_933_length_1167_cov_160.483547_g515_i1 | PRJNA494251 | 933 | 1167 | 160.483547 | 1872.84299349 | root | 1 | Root_unresolved | Root_unresolved | 1967 | 0 | NTclustered | gi|331934|gb|J02255.1|MLMCG | 11786 | g515 | i1 | 97.403 | 98.955441302485 | 1155 | 30 | 99 | 0 | 10 | 1164 | 3790 | 2636 | Moloney murine leukemia virus, complete genome | blastn | 115481 | 1967 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 22784040 | 22784040 | PRJNA494251_P_NODE_638_length_1338_cov_139.075889_g515_i0 | PRJNA494251 | 638 | 1338 | 139.075889 | 1860.83539482 | root | 1 | Root_unresolved | Root_unresolved | 2015 | 0 | NTclustered | gi|331934|gb|J02255.1|MLMCG | 11786 | g515 | i0 | 97.46 | 97.2242152466368 | 1181 | 30 | 97 | 0 | 149 | 1329 | 2610 | 3790 | Moloney murine leukemia virus, complete genome | blastn | 130086 | 2015 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 27487794 | 27487794 | PRJNA494251_P_NODE_5483_length_546_cov_7.926004_g5186_i0 | PRJNA494251 | 5483 | 546 | 7.926004 | 43.27598184 | Murine leukemia virus | 11786 | Viruses | Viruses | 106 | 4.63e-23 | NR | AAA46514.1 | 11786 | g5186 | i0 | 61.4 | 0.483516483516484 | 88 | 34 | 48.4 | 0 | 277 | 14 | 141 | 228 | AAA46514.1 env protein [Murine leukemia virus] | diamond | 264 | 106 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu | ||
| 29508374 | 29508374 | PRJNA494251_P_NODE_24630_length_292_cov_3.191781_g24316_i0 | PRJNA494251 | 24630 | 292 | 3.191781 | 9.32000052 | Murine leukemia virus | 11786 | Viruses | Viruses | 43.1 | 0.0366 | NR | AAC55819.1 | 11786 | g24316 | i0 | 55.8 | 0.441780821917808 | 43 | 19 | 44.2 | 0 | 32 | 160 | 165 | 207 | AAC55819.1 reverse transcriptase, partial [Murine leukemia virus] | diamond | 129 | 43.1 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Gammaretrovirus | Gammaretrovirus murleu |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;