contig_metadata
28 rows where bioproject = "PRJNA494251" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 475414 | 475414 | PRJNA494251_P_NODE_31441_length_267_cov_1.396907_g31127_i0 | PRJNA494251 | 31441 | 267 | 1.396907 | 3.72974169 | Deinococcus grandis | 57498 | Bacteria | Bacteria | 449 | 7.410000000000001e-122 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g31127 | i0 | 99.197 | 1.35580524344569 | 249 | 2 | 93 | 0 | 19 | 267 | 3054093 | 3054341 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 362 | 449 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 3658028 | 3658028 | PRJNA494251_P_NODE_29263_length_274_cov_2.791045_g28949_i0 | PRJNA494251 | 29263 | 274 | 2.791045 | 7.6474633 | Truepera | 332248 | Bacteria | Bacteria | 307 | 4.86e-79 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g28949 | i0 | 92.523 | 532.726277372263 | 214 | 16 | 78 | 0 | 7 | 220 | 762035 | 762248 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 145967 | 307 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 4935076 | 4935076 | PRJNA494251_P_NODE_29044_length_275_cov_1.821782_g28730_i0 | PRJNA494251 | 29044 | 275 | 1.821782 | 5.0099005 | Deinococcus | 1298 | Bacteria | Bacteria | 453 | 5.9300000000000005e-123 | NTclustered | gi|1514756464|dbj|LC433574.1| | 47478 | g28730 | i0 | 96.377 | 106.018181818182 | 276 | 8 | 100 | 2 | 1 | 275 | 412 | 686 | Deinococcus sp. TM138 gene for 16S ribosomal RNA, partial sequence | blastn | 29155 | 453 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 5578664 | 5578664 | PRJNA494251_P_NODE_11905_length_393_cov_1.912500_g11598_i0 | PRJNA494251 | 11905 | 393 | 1.9125 | 7.516125 | Synergistales bacterium | 2268201 | Bacteria | Bacteria | 87 | 6.73e-17 | NR | MBP8996187.1 | 2268201 | g11598 | i0 | 47.8 | 1.72519083969466 | 113 | 57 | 85.5 | 2 | 50 | 385 | 225 | 336 | MBP8996187.1 VCBS domain-containing protein [Synergistales bacterium] | diamond | 678 | 87 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistales bacterium | ||||
| 8759893 | 8759893 | PRJNA494251_P_NODE_41227_length_247_cov_2.649425_g40913_i0 | PRJNA494251 | 41227 | 247 | 2.649425 | 6.54407975 | Thermus | 270 | Bacteria | Bacteria | 449 | 6.78e-122 | NTclustered | gi|1955386990|dbj|AP024305.1| | 274 | g40913 | i0 | 100 | 133.805668016194 | 243 | 0 | 98 | 0 | 2 | 244 | 352927 | 353169 | Thermus thermophilus HB5008 DNA, complete genome | blastn | 33050 | 449 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 13860449 | 13860449 | PRJNA494251_P_NODE_17211_length_337_cov_7.946970_g16897_i0 | PRJNA494251 | 17211 | 337 | 7.94697 | 26.7812889 | Deinococcus | 1298 | Bacteria | Bacteria | 531 | 3.35e-146 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g16897 | i0 | 99.317 | 179.243323442137 | 293 | 2 | 87 | 0 | 45 | 337 | 878598 | 878890 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 60405 | 536 | 0.990671641791045 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 13860552 | 13860552 | PRJNA494251_P_NODE_52151_length_217_cov_36.138889_g51837_i0 | PRJNA494251 | 52151 | 217 | 36.138889 | 78.42138913 | Thermus | 270 | Bacteria | Bacteria | 169 | 1.82e-37 | NTclustered | gi|2199613261|dbj|AP025596.1| | 274 | g51837 | i0 | 100 | 111.746543778802 | 91 | 0 | 83 | 0 | 16 | 106 | 13446 | 13356 | Thermus thermophilus SNM1-1 DNA, complete genome | blastn | 24249 | 169 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 15778190 | 15778190 | PRJNA494251_P_NODE_52553_length_200_cov_4.212598_g52239_i0 | PRJNA494251 | 52553 | 200 | 4.212598 | 8.425196 | Deinococcus metallilatus | 1211322 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1609451317|gb|CP038512.1| | 1211322 | g52239 | i0 | 92.5 | 0.2 | 40 | 2 | 20 | 1 | 1 | 40 | 934049 | 934087 | Deinococcus metallilatus strain MA1002 chromosome | blastn | 40 | 56.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus metallilatus | ||
| 17052553 | 17052553 | PRJNA494251_P_NODE_21714_length_307_cov_2.119658_g21400_i0 | PRJNA494251 | 21714 | 307 | 2.119658 | 6.50735006 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 416 | 8.819999999999998e-112 | NTclustered | gi|2108366028|gb|CP070651.1| | 2026798 | g21400 | i0 | 92.708 | 348.530944625407 | 288 | 21 | 94 | 0 | 3 | 290 | 8033 | 7746 | MAG: Trueperaceae bacterium isolate bin86 chromosome | blastn | 106999 | 416 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 17684625 | 17684625 | PRJNA494251_P_NODE_20994_length_311_cov_2.957983_g20680_i0 | PRJNA494251 | 20994 | 311 | 2.957983 | 9.19932713 | Deinococcus | 1298 | Bacteria | Bacteria | 390 | 5.419999999999998e-104 | NTclustered | gi|470483488|ref|NR_076595.1| | 310783 | g20680 | i0 | 90.268 | 184.421221864952 | 298 | 29 | 96 | 0 | 1 | 298 | 260 | 557 | Deinococcus deserti strain VCD115 23S ribosomal RNA gene, complete sequence | blastn | 57355 | 390 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus deserti | ||
| 17684725 | 17684725 | PRJNA494251_P_NODE_7174_length_487_cov_4.811594_g6871_i0 | PRJNA494251 | 7174 | 487 | 4.811594 | 23.43246278 | Deinococcus | 1298 | Bacteria | Bacteria | 798 | 0 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g6871 | i0 | 96.304 | 338.517453798768 | 487 | 16 | 100 | 1 | 1 | 487 | 2148377 | 2147893 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 164858 | 798 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 18327199 | 18327199 | PRJNA494251_P_NODE_50215_length_240_cov_9.946108_g49901_i0 | PRJNA494251 | 50215 | 240 | 9.946108 | 23.8706592 | Thermus thermophilus | 274 | Bacteria | Bacteria | 346 | 8.84e-91 | NTclustered | gi|2074862859|dbj|AP024933.1| | 274 | g49901 | i0 | 100 | 106.6125 | 187 | 0 | 80 | 0 | 1 | 187 | 12480 | 12666 | Thermus thermophilus AA3-7 DNA, complete genome | blastn | 25587 | 346 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 20233380 | 20233380 | PRJNA494251_P_NODE_51996_length_225_cov_8.164474_g51682_i0 | PRJNA494251 | 51996 | 225 | 8.164474 | 18.3700665 | Thermus | 270 | Bacteria | Bacteria | 348 | 2.28e-91 | NTclustered | gi|37223182|gb|AY379549.1| | 274 | g51682 | i0 | 98.477 | 119.168888888889 | 197 | 3 | 88 | 0 | 4 | 200 | 323 | 519 | Thermus thermophilus TT700 23S ribosomal RNA, 5S ribosomal RNA, and tRNA-Gly genes, complete sequence | blastn | 26813 | 348 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 20877186 | 20877186 | PRJNA494251_P_NODE_37217_length_251_cov_0.865169_g36903_i0 | PRJNA494251 | 37217 | 251 | 0.865169 | 2.17157419 | Tepiditoga spiralis | 2108365 | Bacteria | Bacteria | 132 | 2.84e-26 | NTclustered | gi|1898704378|dbj|AP018712.1| | 2108365 | g36903 | i0 | 79.381 | 4.41434262948207 | 194 | 34 | 76 | 6 | 53 | 243 | 390945 | 391135 | Tepiditoga spiralis sy52 DNA, complete genome | blastn | 1108 | 132 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Petrotogales | Petrotogaceae | Tepiditoga | Tepiditoga spiralis | ||
| 22151873 | 22151873 | PRJNA494251_P_NODE_2738_length_735_cov_4.404834_g2471_i0 | PRJNA494251 | 2738 | 735 | 4.404834 | 32.3755299 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 1184 | 0 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g2471 | i0 | 96.653 | 203.931972789116 | 717 | 16 | 97 | 3 | 18 | 733 | 714555 | 715264 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 149890 | 1184 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 24058845 | 24058845 | PRJNA494251_P_NODE_9259_length_437_cov_2.618132_g8955_i0 | PRJNA494251 | 9259 | 437 | 2.618132 | 11.44123684 | Deinococci | 188787 | Bacteria | Bacteria | 808 | 0 | NTclustered | gi|399532133|gb|JQ627417.1| | 310703 | g8955 | i0 | 100 | 100.12356979405 | 437 | 0 | 100 | 0 | 1 | 437 | 390 | 826 | Uncultured Deinococcales bacterium clone A3_1_3B_118 small subunit ribosomal RNA gene, partial sequence | blastn | 43754 | 808 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | uncultured Deinococcales bacterium | ||||
| 25333182 | 25333182 | PRJNA494251_P_NODE_24960_length_291_cov_1.353211_g24646_i0 | PRJNA494251 | 24960 | 291 | 1.353211 | 3.93784401 | Deinococcus | 1298 | Bacteria | Bacteria | 472 | 1.75e-128 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g24646 | i0 | 95.876 | 323.546391752577 | 291 | 12 | 100 | 0 | 1 | 291 | 2017836 | 2017546 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 94152 | 472 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 26887326 | 26887326 | PRJNA494251_P_NODE_9521_length_432_cov_2.406685_g9216_i0 | PRJNA494251 | 9521 | 432 | 2.406685 | 10.3968792 | Synergistales bacterium | 2268201 | Bacteria | Bacteria | 75.5 | 1.16e-12 | NR | MBP8996187.1 | 2268201 | g9216 | i0 | 41.6 | 1.56944444444444 | 113 | 60 | 77.8 | 3 | 428 | 93 | 241 | 348 | MBP8996187.1 VCBS domain-containing protein [Synergistales bacterium] | diamond | 678 | 75.5 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistales bacterium | ||||
| 27266582 | 27266582 | PRJNA494251_P_NODE_27003_length_283_cov_1.142857_g26689_i0 | PRJNA494251 | 27003 | 283 | 1.142857 | 3.23428531 | Deinococcus xinjiangensis | 457454 | Bacteria | Bacteria | 141 | 1.5e-36 | NR | WP_353541205.1 | 457454 | g26689 | i0 | 97.3 | 0.795053003533569 | 75 | 2 | 79.5 | 0 | 282 | 58 | 20 | 94 | WP_353541205.1 S8 family serine peptidase [Deinococcus xinjiangensis] | diamond | 225 | 141 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus xinjiangensis | ||
| 28845205 | 28845205 | PRJNA494251_P_NODE_16768_length_341_cov_1.701493_g16455_i0 | PRJNA494251 | 16768 | 341 | 1.701493 | 5.80209113 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 79 | 2.5e-15 | NR | MBQ3627073.1 | 2053624 | g16455 | i0 | 49.3 | 1.30205278592375 | 75 | 37 | 65.1 | 1 | 339 | 118 | 44 | 118 | MBQ3627073.1 ribonuclease P subunit p25 family protein [Synergistaceae bacterium] | diamond | 444 | 79 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 29098089 | 29098089 | PRJNA494251_P_NODE_26588_length_284_cov_1.947867_g26274_i0 | PRJNA494251 | 26588 | 284 | 1.947867 | 5.53194228 | Deinococcus sp. D7 | 47478 | Bacteria | Bacteria | 65.5 | 4.81e-11 | NR | QLG13561.1 | 2755035 | g26274 | i0 | 64.6 | 0.507042253521127 | 48 | 16 | 50.7 | 1 | 273 | 130 | 92 | 138 | QLG13561.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Deinococcus sp. D7000] | diamond | 144 | 65.5 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. D7000 | ||
| 30408794 | 30408794 | PRJNA494251_P_NODE_28733_length_276_cov_2.275862_g28419_i0 | PRJNA494251 | 28733 | 276 | 2.275862 | 6.28137912 | PVC group | 1783257 | Bacteria | Bacteria | 48.5 | 3.51e-5 | NR | WP_109606214.1 | 1255275 | g28419 | i0 | 41.9 | 3.27173913043478 | 62 | 36 | 67.4 | 0 | 33 | 218 | 6 | 67 | WP_109606214.1 MULTISPECIES: 50S ribosomal protein L35 [Oceanotoga] | diamond | 903 | 48.5 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Petrotogales | Petrotogaceae | Oceanotoga | |||
| 30772192 | 30772192 | PRJNA494251_P_NODE_38374_length_250_cov_0.870056_g38060_i0 | PRJNA494251 | 38374 | 250 | 0.870056 | 2.17514 | Deinococcus xinjiangensis | 457454 | Bacteria | Bacteria | 68.6 | 2.17e-11 | NR | WP_353543521.1 | 457454 | g38060 | i0 | 97.1 | 0.408 | 34 | 1 | 40.8 | 0 | 147 | 248 | 274 | 307 | WP_353543521.1 magnesium transporter CorA family protein [Deinococcus xinjiangensis] | diamond | 102 | 68.6 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus xinjiangensis | ||
| 31103433 | 31103433 | PRJNA494251_P_NODE_9915_length_425_cov_1.897727_g9610_i0 | PRJNA494251 | 9915 | 425 | 1.897727 | 8.06533975 | Bacteria | 2 | Bacteria | Bacteria | 44.7 | 0.0407 | NR | HOM55507.1 | 2053689 | g9610 | i0 | 29.7 | 1.66588235294118 | 118 | 71 | 76.9 | 4 | 41 | 367 | 152 | 266 | HOM55507.1 RnfABCDGE type electron transport complex subunit C [Thermotogota bacterium] | diamond | 708 | 44.7 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogota bacterium | ||||||
| 31625481 | 31625481 | PRJNA494251_P_NODE_15656_length_351_cov_1.636691_g15343_i0 | PRJNA494251 | 15656 | 351 | 1.636691 | 5.74478541 | Synergistaceae bacterium | 2053624 | Bacteria | Bacteria | 74.7 | 8.28e-13 | NR | MBQ3398288.1 | 2053624 | g15343 | i0 | 44.3 | 2.94871794871795 | 115 | 61 | 96.6 | 2 | 2 | 340 | 788 | 901 | MBQ3398288.1 putative Ig domain-containing protein [Synergistaceae bacterium] | diamond | 1035 | 74.7 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Synergistaceae bacterium | |||
| 31830705 | 31830705 | PRJNA494251_P_NODE_12737_length_382_cov_1.398058_g12429_i0 | PRJNA494251 | 12737 | 382 | 1.398058 | 5.34058156 | Bacteria | 2 | Bacteria | Bacteria | 72.8 | 1.2e-12 | NR | WP_260561237.1 | 1889240 | g12429 | i0 | 42 | 2.80366492146597 | 119 | 60 | 92.7 | 3 | 369 | 16 | 23 | 133 | WP_260561237.1 DUF4397 domain-containing protein [Deinococcus rubellus] | diamond | 1071 | 72.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus rubellus | ||
| 32005221 | 32005221 | PRJNA494251_P_NODE_42198_length_247_cov_0.885057_g41884_i0 | PRJNA494251 | 42198 | 247 | 0.885057 | 2.18609079 | Deinococcus xinjiangensis | 457454 | Bacteria | Bacteria | 103 | 1.53e-23 | NR | WP_353543089.1 | 457454 | g41884 | i0 | 92.1 | 0.765182186234818 | 63 | 5 | 76.5 | 0 | 230 | 42 | 987 | 1049 | WP_353543089.1 eCIS core domain-containing protein [Deinococcus xinjiangensis] | diamond | 189 | 103 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus xinjiangensis | ||
| 32684483 | 32684483 | PRJNA494251_P_NODE_34360_length_258_cov_1.248649_g34046_i0 | PRJNA494251 | 34360 | 258 | 1.248649 | 3.22151442 | root | 1 | Root_unresolved | Root_unresolved | 122 | 1.55e-30 | NR | WP_352413642.1 | 275 | g34046 | i0 | 63.9 | 3.90697674418605 | 83 | 30 | 96.5 | 0 | 1 | 249 | 367 | 449 | WP_352413642.1 phosphoenolpyruvate carboxykinase (ATP) [Thermus sp.] | diamond | 1008 | 123 | 0.991869918699187 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;