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contig_metadata

20 rows where bioproject = "PRJNA494251", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 20 ✖

tax_kingdom 1

  • Pseudomonadati · 20 ✖

bioproject 1

  • PRJNA494251 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2382498 2382498 PRJNA494251_P_NODE_6622_length_505_cov_1.777778_g6321_i0 PRJNA494251 6622 505 1.777778 8.9777789 Pseudomonadati 3379134 Bacteria Bacteria 121 1.33e-22   NTclustered gi|2007135636|gb|CP061800.1| 45655 g6321 i0 75.385 17.5465346534653 260 58 51 6 249 505 7420126 7420382 Desulfonema magnum strain 4be13 chromosome, complete genome blastn 8861 121 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfonema Desulfonema magnum
10035351 10035351 PRJNA494251_P_NODE_32008_length_265_cov_1.515625_g31694_i0 PRJNA494251 32008 265 1.515625 4.01640625 Bacteria 2 Bacteria Bacteria 169 1.15e-49   NR OGE23203.1 1797756 g31694 i0 94.3 2.98867924528302 88 5 99.6 0 1 264 17 104 OGE23203.1 MAG: quinolinate synthase [Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21] diamond 792 169 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21
14503876 14503876 PRJNA494251_P_NODE_15252_length_355_cov_1.893617_g14939_i0 PRJNA494251 15252 355 1.893617 6.72234035 Pseudomonadati 3379134 Bacteria Bacteria 96.7 1.02e-21   NR WP_092215278.1 419481 g14939 i0 48.1 8.03661971830986 106 50 87.9 2 42 353 135 237 WP_092215278.1 triose-phosphate isomerase [Desulfoluna spongiiphila] diamond 2853 97.1 0.995880535530381 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfolunaceae Desulfoluna Desulfoluna spongiiphila
14504156 14504156 PRJNA494251_P_NODE_38072_length_250_cov_0.870056_g37758_i0 PRJNA494251 38072 250 0.870056 2.17514 Desulfuromonas sp. DDH964 1823759 Bacteria Bacteria 91.6 4.8e-14   NTclustered gi|1015516084|gb|CP015080.1| 1823759 g37758 i0 100 20.708 49 0 20 0 202 250 2882299 2882347 Desulfuromonas sp. DDH964 chromosome, complete genome blastn 5177 91.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp. DDH964
23427929 23427929 PRJNA494251_P_NODE_47559_length_242_cov_7.426036_g47245_i0 PRJNA494251 47559 242 7.426036 17.97100712 Desulfosarcina widdelii 947919 Bacteria Bacteria 147 9.72e-31   NTclustered gi|1773416083|dbj|AP021875.1| 947919 g47245 i0 89.167 83.698347107438 120 10 49 3 33 151 6916258 6916375 Desulfosarcina widdelii PP31 DNA, complete genome blastn 20255 147 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfosarcina Desulfosarcina widdelii
26807785 26807785 PRJNA494251_P_NODE_19701_length_319_cov_1.869919_g19387_i0 PRJNA494251 19701 319 1.869919 5.96504161 Bacteria 2 Bacteria Bacteria 51.2 2.33e-5   NR HKJ04526.1 3065857 g19387 i0 35.9 1.97492163009404 78 46 72.4 2 317 87 67 141 HKJ04526.1 Hsp20/alpha crystallin family protein [Geopsychrobacteraceae bacterium] diamond 630 51.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae   Geopsychrobacteraceae bacterium
26887303 26887303 PRJNA494251_P_NODE_36381_length_252_cov_1.441341_g36067_i0 PRJNA494251 36381 252 1.441341 3.63217932 Desulfoplanes formicivorans 1592317 Bacteria Bacteria 44.7 0.00863   NR WP_069859250.1 1592317 g36067 i0 43.9 0.488095238095238 41 23 48.8 0 101 223 112 152 WP_069859250.1 AsmA family protein [Desulfoplanes formicivorans] diamond 123 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfoplanaceae Desulfoplanes Desulfoplanes formicivorans
27045311 27045311 PRJNA494251_P_NODE_12862_length_380_cov_1.954397_g12554_i0 PRJNA494251 12862 380 1.954397 7.4267086 Desulfamplus sp. 2006184 Bacteria Bacteria 89 1.99e-20   NR MBF0379354.1 2006184 g12554 i0 84 1.17631578947368 50 8 39.5 0 41 190 30 79 MBF0379354.1 porin [Desulfamplus sp.] diamond 447 89 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfamplus Desulfamplus sp.
28213663 28213663 PRJNA494251_P_NODE_33586_length_260_cov_1.647059_g33272_i0 PRJNA494251 33586 260 1.647059 4.2823534 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 52 2.19e-5   NR MEE8382216.1 2202153 g33272 i0 35.7 0.969230769230769 84 53 95.8 1 259 11 121 204 MEE8382216.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 252 52 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29397749 29397749 PRJNA494251_P_NODE_48329_length_242_cov_0.911243_g48015_i0 PRJNA494251 48329 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 128 5.36e-33   NR WP_014259438.1 873 g48015 i0 73.4 8.85123966942149 79 21 97.9 0 242 6 42 120 WP_014259438.1 adenosylhomocysteinase [Desulfocurvibacter africanus] diamond 2142 129 0.992248062015504 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfocurvibacter Desulfocurvibacter africanus
29634374 29634374 PRJNA494251_P_NODE_36590_length_251_cov_2.039326_g36276_i0 PRJNA494251 36590 251 2.039326 5.11870826 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 135 9.2e-39   NR GJM17744.1 2202153 g36276 i0 79.5 1.9840637450199201 83 17 99.2 0 250 2 19 101 GJM17744.1 MAG: hypothetical protein DHS20C13_30710 [Thermodesulfobacteriota bacterium] diamond 498 135 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29919080 29919080 PRJNA494251_P_NODE_19851_length_318_cov_1.857143_g19537_i0 PRJNA494251 19851 318 1.857143 5.90571474 Syntrophorhabdus sp. PtaU1.Bin153 1811705 Bacteria Bacteria 98.2 4.179999999999999e-23   NR OPY80869.1 1811705 g19537 i0 50.5 3.58490566037736 95 46 89.6 1 316 32 92 185 OPY80869.1 MAG: heat shock protein GrpE [Syntrophorhabdus sp. PtaU1.Bin153] diamond 1140 98.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae Syntrophorhabdus Syntrophorhabdus sp. PtaU1.Bin153
30013839 30013839 PRJNA494251_P_NODE_42711_length_246_cov_1.352601_g42397_i0 PRJNA494251 42711 246 1.352601 3.32739846 Syntrophales bacterium 2928017 Bacteria Bacteria 63.5 1.7e-9   NR HET6490911.1 2928017 g42397 i0 46.9 0.780487804878049 64 33 78 1 238 47 132 194 HET6490911.1 C1 family peptidase [Syntrophales bacterium] diamond 192 63.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
30424907 30424907 PRJNA494251_P_NODE_22653_length_302_cov_1.746725_g22339_i0 PRJNA494251 22653 302 1.746725 5.2751095 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 73.2 4.6e-14   NR MEW5914649.1 2202153 g22339 i0 38.6 2.80132450331126 88 48 87.4 1 298 35 35 116 MEW5914649.1 protease inhibitor I42 family protein [Thermodesulfobacteriota bacterium] diamond 846 73.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31245968 31245968 PRJNA494251_P_NODE_38235_length_250_cov_0.870056_g37921_i0 PRJNA494251 38235 250 0.870056 2.17514 Desulfatiglans sp. 1969697 Bacteria Bacteria 147 1.4199999999999999e-42   NR NLD38355.1 1969697 g37921 i0 85.4 0.984 82 12 98.4 0 3 248 31 112 NLD38355.1 class I SAM-dependent methyltransferase [Desulfatiglans sp.] diamond 246 147 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfatiglandales Desulfatiglandaceae Desulfatiglans Desulfatiglans sp.
31309196 31309196 PRJNA494251_P_NODE_46615_length_243_cov_1.070588_g46301_i0 PRJNA494251 46615 243 1.070588 2.60152884 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 50.8 5.06e-5   NR MFC1834884.1 2202153 g46301 i0 31.3 1.76543209876543 80 50 97.5 2 6 242 30 105 MFC1834884.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 429 50.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31467565 31467565 PRJNA494251_P_NODE_15296_length_355_cov_1.088652_g14983_i0 PRJNA494251 15296 355 1.088652 3.8647146 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 56.6 8.35e-7   NR GJM17643.1 2202153 g14983 i0 39.2 0.667605633802817 79 47 65.9 1 89 322 134 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 237 56.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32448380 32448380 PRJNA494251_P_NODE_34439_length_257_cov_6.010870_g34125_i0 PRJNA494251 34439 257 6.01087 15.4479359 Desulfosediminicola flagellatus 2569541 Bacteria Bacteria 48.5 3.97e-4   NR WP_136805682.1 2569541 g34125 i0 59.4 0.373540856031128 32 10 37.4 1 256 161 468 496 WP_136805682.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Desulfosediminicola flagellatus] diamond 96 48.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfosediminicola Desulfosediminicola flagellatus
32543280 32543280 PRJNA494251_P_NODE_7339_length_483_cov_1.482927_g7036_i0 PRJNA494251 7339 483 1.482927 7.16253741 Desulfobacterales bacterium 2044940 Bacteria Bacteria 94.7 1.62e-19   NR MBF0226922.1 2044940 g7036 i0 36.8 0.962732919254658 155 90 91.3 2 30 470 109 263 MBF0226922.1 sulfotransferase domain-containing protein [Desulfobacterales bacterium] diamond 465 94.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
32763547 32763547 PRJNA494251_P_NODE_49200_length_241_cov_1.119048_g48886_i0 PRJNA494251 49200 241 1.119048 2.69690568 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 52.8 8.04e-7   NR GJM17551.1 2202153 g48886 i0 37.7 0.759336099585062 61 38 75.9 0 21 203 14 74 GJM17551.1 MAG: hypothetical protein DHS20C13_28780 [Thermodesulfobacteriota bacterium] diamond 183 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;