RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA494251", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15134988 15134988 PRJNA494251_P_NODE_5192_length_559_cov_1.349794_g4898_i0 PRJNA494251 5192 559 1.349794 7.54534846 Pseudomonadati 3379134 Bacteria Bacteria 266 3.8299999999999986e-87   NR RMF84539.1 2026769 g4898 i0 67.2 10.8890876565295 186 61 99.8 0 2 559 12 197 RMF84539.1 MAG: adenylyl-sulfate kinase, partial [Nitrospinota bacterium] diamond 6087 266 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
26696951 26696951 PRJNA494251_P_NODE_24981_length_291_cov_1.183486_g24667_i0 PRJNA494251 24981 291 1.183486 3.44394426 Nitrospina sp. 2024844 Bacteria Bacteria 54.7 4.1e-6   NR MBT4374554.1 2024844 g24667 i0 44 1.54639175257732 75 38 73.2 1 44 256 11 85 MBT4374554.1 hypothetical protein [Nitrospina sp.] diamond 450 54.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Nitrospina Nitrospina sp.
31435721 31435721 PRJNA494251_P_NODE_41476_length_247_cov_1.327586_g41162_i0 PRJNA494251 41476 247 1.327586 3.27913742 Nitrospinota bacterium 2026769 Bacteria Bacteria 43.5 0.0213   NR MBI5178917.1 2026769 g41162 i0 44.2 0.522267206477733 43 24 52.2 0 56 184 203 245 MBI5178917.1 adenosylmethionine--8-amino-7-oxononanoate transaminase [Nitrospinota bacterium] diamond 129 43.5 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;