RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA494251", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26950202 26950202 PRJNA494251_P_NODE_19602_length_320_cov_1.246964_g19288_i0 PRJNA494251 19602 320 1.246964 3.9902848 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 70.5 1.4e-11   NR HZW40622.1 2651163 g19288 i0 46.3 1.865625 95 46 86.3 4 2 277 131 223 HZW40622.1 serine hydrolase [Ignavibacteriaceae bacterium] diamond 597 70.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
27614193 27614193 PRJNA494251_P_NODE_4664_length_588_cov_2.176699_g4370_i0 PRJNA494251 4664 588 2.176699 12.79899012 Ignavibacteria bacterium 2053306 Bacteria Bacteria 166 3.2899999999999996e-47   NR MDP3443447.1 2053306 g4370 i0 92 0.448979591836735 88 7 44.9 0 323 586 1 88 MDP3443447.1 TIGR04219 family outer membrane beta-barrel protein [Ignavibacteria bacterium] diamond 264 166 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31846853 31846853 PRJNA494251_P_NODE_26677_length_284_cov_1.440758_g26363_i0 PRJNA494251 26677 284 1.440758 4.09175272 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 67.4 3.27e-11   NR MFA7418788.1 2614255 g26363 i0 74.3 0.73943661971831 35 9 37 0 15 119 176 210 MFA7418788.1 HAD family acid phosphatase [Melioribacteraceae bacterium] diamond 210 67.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;