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contig_metadata

20 rows where bioproject = "PRJNA494251", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 20 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 20 ✖

bioproject 1

  • PRJNA494251 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475601 475601 PRJNA494251_P_NODE_49401_length_241_cov_0.916667_g49087_i0 PRJNA494251 49401 241 0.916667 2.20916747 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 263 9.21e-66   NTclustered gi|2874253978|emb|OY970303.1| 412054 g49087 i0 86.585 20.7344398340249 246 23 100 7 1 241 3485804 3486044 MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 blastn 4997 263 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
19601459 19601459 PRJNA494251_P_NODE_50356_length_239_cov_3.692771_g50042_i0 PRJNA494251 50356 239 3.692771 8.82572269 Gemmatimonas 173479 Bacteria Bacteria 64.3 6.13e-10   NR WP_331049353.1 1962908 g50042 i0 91.7 2.58577405857741 36 3 45.2 0 2 109 256 291 WP_331049353.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Gemmatimonas sp.] diamond 618 64.7 0.993817619783617 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp.
20876833 20876833 PRJNA494251_P_NODE_12357_length_387_cov_1.302548_g12050_i0 PRJNA494251 12357 387 1.302548 5.04086076 Longimicrobiales bacterium 2910168 Bacteria Bacteria 91.6 7.83e-14   NTclustered gi|2575820295|emb|OY730414.1| 2910168 g12050 i0 82.243 33.4728682170543 107 17 27 2 30 135 1273691 1273586 MAG: Longimicrobiales bacterium isolate 35361606-ee58-41ba-9638-b7483a57a1ce genome assembly, chromosome: 1 blastn 12954 91.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
23427613 23427613 PRJNA494251_P_NODE_19259_length_322_cov_1.847390_g18945_i0 PRJNA494251 19259 322 1.84739 5.9485958 Bacteria 2 Bacteria Bacteria 111 1.38e-26   NR HXY29105.1 2026741 g18945 i0 61.6 17.0031055900621 99 38 92.2 0 2 298 301 399 HXY29105.1 phosphoglycerate kinase [Gemmatimonadaceae bacterium] diamond 5475 111 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
26823932 26823932 PRJNA494251_P_NODE_42461_length_246_cov_2.635838_g42147_i0 PRJNA494251 42461 246 2.635838 6.48416148 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 111 2.22e-26   NR MBP6443589.1 2448054 g42147 i0 67.1 1.89024390243902 79 26 96.3 0 245 9 27 105 MBP6443589.1 hypothetical protein [Gemmatimonadales bacterium] diamond 465 111 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27866449 27866449 PRJNA494251_P_NODE_11045_length_405_cov_2.415663_g10739_i0 PRJNA494251 11045 405 2.415663 9.78343515 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 75.5 8.27e-13   NR HXL35100.1 2448054 g10739 i0 39.4 1.99259259259259 137 69 95.6 4 396 10 230 360 HXL35100.1 NHL repeat-containing protein [Gemmatimonadales bacterium] diamond 807 75.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28150951 28150951 PRJNA494251_P_NODE_31285_length_267_cov_2.185567_g30971_i0 PRJNA494251 31285 267 2.185567 5.83546389 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 72 2.43e-12   NR NNE08319.1 2026742 g30971 i0 51.9 0.584269662921348 52 23 58.4 1 5 160 277 326 NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] diamond 156 72 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28324108 28324108 PRJNA494251_P_NODE_246_length_1884_cov_36.098840_g195_i0 PRJNA494251 246 1884 36.09884 680.1021456 Gemmatimonadota 142182 Bacteria Bacteria 111 9.85e-23   NR HKH91170.1 2026741 g195 i0 54.3 0.914012738853503 116 53 18.5 0 732 1079 192 307 HKH91170.1 DUF2382 domain-containing protein [Gemmatimonadaceae bacterium] diamond 1722 111 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
28498221 28498221 PRJNA494251_P_NODE_26507_length_285_cov_0.740566_g26193_i0 PRJNA494251 26507 285 0.740566 2.1106131 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 84.7 3.1e-17   NR HET7456045.1 2026741 g26193 i0 48.9 3.78947368421053 94 46 98.9 1 2 283 174 265 HET7456045.1 DUF2382 domain-containing protein [Gemmatimonadaceae bacterium] diamond 1080 84.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
28624617 28624617 PRJNA494251_P_NODE_387_length_1595_cov_3.342313_g292_i1 PRJNA494251 387 1595 3.342313 53.30989235 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 103 9.47e-21   NR MBW3572569.1 2026742 g292 i1 47.7 0.479623824451411 132 58 23.7 2 890 1267 134 260 MBW3572569.1 DUF2382 domain-containing protein [Gemmatimonadota bacterium] diamond 765 103 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29887511 29887511 PRJNA494251_P_NODE_371_length_1627_cov_3.556628_g292_i0 PRJNA494251 371 1627 3.556628 57.86633756 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 103 1e-20   NR MBW3572569.1 2026742 g292 i0 47.7 0.47019053472649 132 58 23.2 2 890 1267 134 260 MBW3572569.1 DUF2382 domain-containing protein [Gemmatimonadota bacterium] diamond 765 103 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30218807 30218807 PRJNA494251_P_NODE_22712_length_302_cov_1.340611_g22398_i0 PRJNA494251 22712 302 1.340611 4.04864522 Pseudomonadati 3379134 Bacteria Bacteria 102 3.94e-25   NR MEJ2187510.1 2026742 g22398 i0 58.4 3.11920529801325 77 32 76.5 0 2 232 87 163 MEJ2187510.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Gemmatimonadota bacterium] diamond 942 102 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30298591 30298591 PRJNA494251_P_NODE_632_length_1346_cov_60.905734_g511_i0 PRJNA494251 632 1346 60.905734 819.79117964 Longimicrobium sp. 2029185 Bacteria Bacteria 93.6 1.98e-17   NR HEX6372403.1 2029185 g511 i0 49.1 0.523774145616642 114 57 25.2 1 797 459 135 248 HEX6372403.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 705 93.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
30361742 30361742 PRJNA494251_P_NODE_33772_length_259_cov_3.010753_g33458_i0 PRJNA494251 33772 259 3.010753 7.79785027 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 69.3 1.87e-11   NR HEY7636025.1 2448054 g33458 i0 42 0.799227799227799 69 39 78.8 1 33 236 410 478 HEY7636025.1 MBL fold metallo-hydrolase [Gemmatimonadales bacterium] diamond 207 69.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30740369 30740369 PRJNA494251_P_NODE_11274_length_402_cov_1.598784_g10968_i0 PRJNA494251 11274 402 1.598784 6.42711168 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 67.4 8.02e-12   NR MBP6443590.1 2448054 g10968 i0 52.1 0.529850746268657 71 33 52.2 1 156 365 5 75 MBP6443590.1 hypothetical protein [Gemmatimonadales bacterium] diamond 213 67.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
31783538 31783538 PRJNA494251_P_NODE_2517_length_763_cov_7.355072_g2257_i0 PRJNA494251 2517 763 7.355072 56.11919936 Longimicrobium sp. 2029185 Bacteria Bacteria 122 1.25e-28   NR HEX8433399.1 2029185 g2257 i0 53.7 0.534731323722149 136 63 53.5 0 522 115 182 317 HEX8433399.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 408 122 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
31799103 31799103 PRJNA494251_P_NODE_31917_length_265_cov_1.984375_g31603_i0 PRJNA494251 31917 265 1.984375 5.25859375 Bacteria 2 Bacteria Bacteria 66.6 1.86e-10   NR MBK6420664.1 2026742 g31603 i0 35.7 3.81509433962264 84 53 95.1 1 12 263 44 126 MBK6420664.1 transmembrane domain-containing protein [Gemmatimonadota bacterium] diamond 1011 66.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32210641 32210641 PRJNA494251_P_NODE_33698_length_260_cov_1.235294_g33384_i0 PRJNA494251 33698 260 1.235294 3.2117644 FCB group 1783270 Bacteria Bacteria 56.6 6.11e-7   NR MEP6833624.1 1962908 g33384 i0 39.5 3.36923076923077 76 43 87.7 1 2 229 1306 1378 MEP6833624.1 SdrD B-like domain-containing protein [Gemmatimonas sp.] diamond 876 57 0.992982456140351 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp.
32495514 32495514 PRJNA494251_P_NODE_519_length_1450_cov_48.972404_g413_i0 PRJNA494251 519 1450 48.972404 710.099858 Gemmatimonadota 142182 Bacteria Bacteria 86.3 8.4e-15   NR HEX6372403.1 2029185 g413 i0 42.7 1.1151724137931 131 74 26.9 1 831 442 135 265 HEX6372403.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 1617 86.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
32763534 32763534 PRJNA494251_P_NODE_360_length_1643_cov_54.443312_g283_i0 PRJNA494251 360 1643 54.443312 894.50361616 Longimicrobium sp. 2029185 Bacteria Bacteria 97.4 1.62e-18   NR HEX2210215.1 2029185 g283 i0 47.4 0.441874619598296 114 59 20.6 1 667 1005 135 248 HEX2210215.1 DUF2382 domain-containing protein [Longimicrobium sp.] diamond 726 97.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;