RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA494251", tax_clade = "Candidatus Pacearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 2 ✖

bioproject 1

  • PRJNA494251 · 2 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9403398 9403398 PRJNA494251_P_NODE_36868_length_251_cov_0.932584_g36554_i0 PRJNA494251 36868 251 0.932584 2.34078584 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 99.4 5.01e-22   NR MBI2043280.1 2026773 g36554 i0 59 11.9043824701195 83 25 99.2 2 2 250 131 204 MBI2043280.1 ribonucleoside-diphosphate reductase subunit alpha [Candidatus Pacearchaeota archaeon] diamond 2988 99.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
31815305 31815305 PRJNA494251_P_NODE_25977_length_287_cov_1.079439_g25663_i0 PRJNA494251 25977 287 1.079439 3.09798993 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 144 8.849999999999999e-38   NR MBI2043280.1 2026773 g25663 i0 65.3 1.98606271777003 95 33 99.3 0 285 1 641 735 MBI2043280.1 ribonucleoside-diphosphate reductase subunit alpha [Candidatus Pacearchaeota archaeon] diamond 570 144 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;