RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA494251", tax_clade = "Bacteria candidate phyla" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28087519 28087519 PRJNA494251_P_NODE_50145_length_241_cov_0.910714_g49831_i0 PRJNA494251 50145 241 0.910714 2.19482074 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 70.1 4.33e-12   NR MCK4941024.1 2052148 g49831 i0 48.1 2.96265560165975 79 38 97.1 2 7 240 23 99 MCK4941024.1 EamA family transporter [candidate division WOR-3 bacterium] diamond 714 70.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
30661216 30661216 PRJNA494251_P_NODE_36133_length_253_cov_1.050000_g35819_i0 PRJNA494251 36133 253 1.05 2.6565 Bacillati 1783272 Bacteria Bacteria 111 2.4899999999999996e-29   NR MEO0226109.1 2052148 g35819 i0 61 2.91699604743083 82 32 97.2 0 251 6 35 116 MEO0226109.1 RidA family protein [candidate division WOR-3 bacterium] diamond 738 112 0.991071428571429 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32810541 32810541 PRJNA494251_P_NODE_10920_length_407_cov_2.574850_g10614_i0 PRJNA494251 10920 407 2.57485 10.4796395 Bacteria 2 Bacteria Bacteria 124 6.59e-31   NR MCS7245191.1 2052148 g10614 i0 48.4 4.59213759213759 124 58 91.4 2 407 36 280 397 MCS7245191.1 ornithine--oxo-acid transaminase [candidate division WOR-3 bacterium] diamond 1869 125 0.992 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;