RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA494251", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
475509 475509 PRJNA494251_P_NODE_4041_length_625_cov_2.112319_g3751_i0 PRJNA494251 4041 625 2.112319 13.20199375 Bacteria 2 Bacteria Bacteria 199 1.26e-56   NR MCX7018058.1 2107588 g3751 i0 51.7 2.9664 207 100 99.4 0 623 3 410 616 MCX7018058.1 transketolase [Candidatus Sumerlaeota bacterium] diamond 1854 201 0.990049751243781 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium
27266579 27266579 PRJNA494251_P_NODE_26083_length_286_cov_1.962441_g25769_i0 PRJNA494251 26083 286 1.962441 5.61258126 Sumerlaeia bacterium 3066091 Bacteria Bacteria 88.2 5.57e-18   NR MEQ8821692.1 3066091 g25769 i0 52.4 0.86013986013986 82 39 86 0 1 246 103 184 MEQ8821692.1 aspartate aminotransferase family protein [Sumerlaeia bacterium] diamond 246 88.2 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Sumerlaeia bacterium
28876896 28876896 PRJNA494251_P_NODE_2688_length_742_cov_2.174888_g2423_i0 PRJNA494251 2688 742 2.174888 16.13766896 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 275 1.4699999999999992e-87   NR MBX7246531.1 2315423 g2423 i0 56.1 9.35175202156334 230 99 93 1 13 702 170 397 MBX7246531.1 elongation factor Tu [Candidatus Sumerlaeaceae bacterium] diamond 6939 275 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;