RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA494251", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA494251 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13229003 13229003 PRJNA494251_P_NODE_16951_length_340_cov_1.153558_g16638_i0 PRJNA494251 16951 340 1.153558 3.9220972 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 63.2 2.97e-10   NR HLX36150.1 2785449 g16638 i0 52.1 4.27058823529412 71 31 60 2 4 207 9 79 HLX36150.1 RNA-binding protein [Candidatus Binataceae bacterium] diamond 1452 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
27866467 27866467 PRJNA494251_P_NODE_22745_length_302_cov_1.008734_g22431_i0 PRJNA494251 22745 302 1.008734 3.04637668 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 52.4 2.93e-5   NR MEO6163492.1 2838779 g22431 i0 35.7 2.98013245033113 112 47 86.4 3 6 266 286 397 MEO6163492.1 DegQ family serine endoprotease [Candidatus Binatia bacterium] diamond 900 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28656057 28656057 PRJNA494251_P_NODE_38327_length_250_cov_0.870056_g38013_i0 PRJNA494251 38327 250 0.870056 2.17514 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 52.4 1.53e-5   NR HEX7406725.1 2838779 g38013 i0 37.8 1.968 82 45 96 2 248 9 286 363 HEX7406725.1 SDR family oxidoreductase [Candidatus Binatia bacterium] diamond 492 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;