RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA494251", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA494251 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29871413 29871413 PRJNA494251_P_NODE_12651_length_383_cov_1.635484_g12343_i0 PRJNA494251 12651 383 1.635484 6.26390372 Bacteria 2 Bacteria Bacteria 136 2.66e-34   NR OGD22436.1 1797273 g12343 i0 55.9 4.96605744125326 127 54 99.5 2 382 2 408 532 OGD22436.1 MAG: hypothetical protein A2W03_01465 [Candidatus Aminicenantes bacterium RBG_16_63_16] diamond 1902 137 0.992700729927007 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_16_63_16
31293151 31293151 PRJNA494251_P_NODE_45315_length_244_cov_1.099415_g45001_i0 PRJNA494251 45315 244 1.099415 2.6825726 Pseudomonadati 3379134 Bacteria Bacteria 66.2 1.94e-10   NR MBE0460523.1 2052149 g45001 i0 41.5 2.38524590163934 65 38 79.9 0 227 33 893 957 MBE0460523.1 NAD-glutamate dehydrogenase [Candidatus Aminicenantes bacterium] diamond 582 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;